/******************************************************************************* * GenPlay, Einstein Genome Analyzer * Copyright (C) 2009, 2014 Albert Einstein College of Medicine * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. * Authors: Julien Lajugie <julien.lajugie@einstein.yu.edu> * Nicolas Fourel <nicolas.fourel@einstein.yu.edu> * Eric Bouhassira <eric.bouhassira@einstein.yu.edu> * * Website: <http://genplay.einstein.yu.edu> ******************************************************************************/ package edu.yu.einstein.genplay.gui.action.project; import java.io.IOException; import java.util.concurrent.CountDownLatch; import javax.swing.ActionMap; import edu.yu.einstein.genplay.core.manager.project.ProjectManager; import edu.yu.einstein.genplay.core.manager.recording.ProjectRecording; import edu.yu.einstein.genplay.core.manager.recording.RecordingManager; import edu.yu.einstein.genplay.exception.ExceptionManager; import edu.yu.einstein.genplay.gui.action.TrackListActionWorker; /** * Loads a project from a file * * @author Julien Lajugie * @author Nicolas Fourel * @version 0.1 */ public class PAInitMGManager extends TrackListActionWorker<Void> { private static final long serialVersionUID = 6498078428524511709L; // generated ID private static final String DESCRIPTION = "Initialize Multi Genome Manager"; // tooltip private static final String ACTION_NAME = "Initialize Multi Genome Manager"; // action name /** * key of the action in the {@link ActionMap} */ public static final String ACTION_KEY = PAInitMGManager.class.getName(); private boolean hasBeenInitialized; /** * Creates an instance of {@link PAInitMGManager} */ public PAInitMGManager() { super(); putValue(NAME, ACTION_NAME); putValue(ACTION_COMMAND_KEY, ACTION_KEY); putValue(SHORT_DESCRIPTION, DESCRIPTION); hasBeenInitialized = false; } @Override protected void doAtTheEnd(Void actionResult) { if (latch != null) { latch.countDown(); } } /** * @return true if the managers have been initialized, false otherwise */ public boolean hasBeenInitialized() { return hasBeenInitialized; } @Override protected Void processAction() throws Exception { if (ProjectManager.getInstance().isMultiGenomeProject()) { notifyActionStart("Loading Multi-Genome Information", 1, false); ProjectRecording projectRecording = RecordingManager.getInstance().getProjectRecording(); try { projectRecording.initMultiGenomeManager(); hasBeenInitialized = true; } catch (IOException e) { ExceptionManager.getInstance().caughtException(e); } catch (ClassNotFoundException e) { ExceptionManager.getInstance().caughtException(e); } } else { hasBeenInitialized = true; } return null; } /** * @param latch the latch to set */ public void setLatch(CountDownLatch latch) { this.latch = latch; } }