/*******************************************************************************
* GenPlay, Einstein Genome Analyzer
* Copyright (C) 2009, 2014 Albert Einstein College of Medicine
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
* Authors: Julien Lajugie <julien.lajugie@einstein.yu.edu>
* Nicolas Fourel <nicolas.fourel@einstein.yu.edu>
* Eric Bouhassira <eric.bouhassira@einstein.yu.edu>
*
* Website: <http://genplay.einstein.yu.edu>
******************************************************************************/
package edu.yu.einstein.genplay.dataStructure.scoredChromosomeWindow;
import java.io.IOException;
import java.io.ObjectInputStream;
import java.io.Serializable;
import edu.yu.einstein.genplay.dataStructure.chromosomeWindow.ChromosomeWindow;
/**
* Simple implementation of the {@link ScoredChromosomeWindow} interface.
* {@link ScoredChromosomeWindow} objects are immutable.
* @author Julien Lajugie
*/
public final class SimpleScoredChromosomeWindow extends AbstractScoredChromosomeWindow implements ScoredChromosomeWindow, Serializable, Cloneable, Comparable<ChromosomeWindow> {
/** Generated serial ID */
private static final long serialVersionUID = 8073707507054963197L;
/** Version number of the class */
private static final transient int CLASS_VERSION_NUMBER = 0;
/** Start position of the window */
private final int start;
/** Stop position of the window */
private final int stop;
/** Score of the window */
private final float score;
/**
* Creates an instance of a {@link SimpleScoredChromosomeWindow}
* @param start start position of the window
* @param stop stop position of the window
* @param score score of the window
*/
public SimpleScoredChromosomeWindow(int start, int stop, float score) {
this.start = start;
this.stop = stop;
this.score = score;
}
@Override
public float getScore() {
return score;
}
@Override
public int getStart() {
return start;
}
@Override
public int getStop() {
return stop;
}
/**
* Method used for deserialization
* @param in
* @throws IOException
* @throws ClassNotFoundException
*/
private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException {
// read the version number of the object
in.readInt();
// read the final fields
in.defaultReadObject();
}
/**
* Method used for serialization
* @param out
* @throws IOException
*/
private void writeObject(java.io.ObjectOutputStream out) throws IOException {
// write the format version number of the object
out.writeInt(CLASS_VERSION_NUMBER);
// write the final fields
out.defaultWriteObject();
}
}