/******************************************************************************* * GenPlay, Einstein Genome Analyzer * Copyright (C) 2009, 2014 Albert Einstein College of Medicine * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. * Authors: Julien Lajugie <julien.lajugie@einstein.yu.edu> * Nicolas Fourel <nicolas.fourel@einstein.yu.edu> * Eric Bouhassira <eric.bouhassira@einstein.yu.edu> * * Website: <http://genplay.einstein.yu.edu> ******************************************************************************/ package edu.yu.einstein.genplay.dataStructure.list.chromosomeWideList.SCWListView; import edu.yu.einstein.genplay.dataStructure.list.listView.ListViewBuilder; import edu.yu.einstein.genplay.dataStructure.scoredChromosomeWindow.ScoredChromosomeWindow; import edu.yu.einstein.genplay.exception.exceptions.ObjectAlreadyBuiltException; /** * Interface defining {@link ListViewBuilder} for {@link ScoredChromosomeWindow} objects. * Adds an {@link #addElementToBuild(int, int, float)} method to avoid having to create a * temporary {@link ScoredChromosomeWindow} object to pass to the builders. * @author Julien Lajugie */ public interface SCWListViewBuilder extends ListViewBuilder<ScoredChromosomeWindow> { /** * Adds an element to the ListView that will be built. * To assure that ListView objects are immutable, this method * will throw an exception if called after the getListView() has been called. * Checks that the elements are added in start position order. * @param start start position of the SCW to add * @param stop stop position of the SCW to add * @param score score value of the SCW to add * @throws ObjectAlreadyBuiltException */ public void addElementToBuild(int start, int stop, float score) throws ObjectAlreadyBuiltException; /** * {@inheritDoc} */ @Override public SCWListViewBuilder clone(); }