/* * Copyright 1998-2014 University Corporation for Atmospheric Research/Unidata * * Portions of this software were developed by the Unidata Program at the * University Corporation for Atmospheric Research. * * Access and use of this software shall impose the following obligations * and understandings on the user. The user is granted the right, without * any fee or cost, to use, copy, modify, alter, enhance and distribute * this software, and any derivative works thereof, and its supporting * documentation for any purpose whatsoever, provided that this entire * notice appears in all copies of the software, derivative works and * supporting documentation. Further, UCAR requests that the user credit * UCAR/Unidata in any publications that result from the use of this * software or in any product that includes this software. The names UCAR * and/or Unidata, however, may not be used in any advertising or publicity * to endorse or promote any products or commercial entity unless specific * written permission is obtained from UCAR/Unidata. The user also * understands that UCAR/Unidata is not obligated to provide the user with * any support, consulting, training or assistance of any kind with regard * to the use, operation and performance of this software nor to provide * the user with any updates, revisions, new versions or "bug fixes." * * THIS SOFTWARE IS PROVIDED BY UCAR/UNIDATA "AS IS" AND ANY EXPRESS OR * IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED * WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE * DISCLAIMED. IN NO EVENT SHALL UCAR/UNIDATA BE LIABLE FOR ANY SPECIAL, * INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING * FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT, * NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION * WITH THE ACCESS, USE OR PERFORMANCE OF THIS SOFTWARE. */ package ucar.nc2.iosp; import ucar.ma2.Section; import ucar.ma2.InvalidRangeException; /** * Indexer into data that has a "regular" layout, like netcdf-3 and hdf5 compact and contiguous storage. * The data is contiguous, with outer dimension varying fastest. * Given a Section, this calculates the set of contiguous "chunks" of the wanted data into the stored data. * The wanted section is always a subset of the data section (see RegularSectionLayout where thats not the case). * * @author caron * @since Jan 3, 2008 */ public class LayoutRegular implements Layout { private IndexChunker chunker; private long startPos; // starting position private int elemSize; // size of each element /** * Constructor. * * @param startPos starting address of the entire data array. * @param elemSize size of an element in bytes. * @param varShape shape of the entire data array. * @param wantSection the wanted section of data, contains a List of Range objects. * @throws InvalidRangeException if ranges are misformed */ public LayoutRegular(long startPos, int elemSize, int[] varShape, Section wantSection) throws InvalidRangeException { assert startPos >= 0; assert elemSize > 0; this.startPos = startPos; this.elemSize = elemSize; chunker = new IndexChunker(varShape, wantSection); } public long getTotalNelems() { return chunker.getTotalNelems(); } public int getElemSize() { return elemSize; } public boolean hasNext() { return chunker.hasNext(); } public Chunk next() { IndexChunker.Chunk chunk = chunker.next(); chunk.setSrcPos( startPos + chunk.getSrcElem() * elemSize); return chunk; } }