/*
* Copyright (c) 1998 - 2009. University Corporation for Atmospheric Research/Unidata
* Portions of this software were developed by the Unidata Program at the
* University Corporation for Atmospheric Research.
*
* Access and use of this software shall impose the following obligations
* and understandings on the user. The user is granted the right, without
* any fee or cost, to use, copy, modify, alter, enhance and distribute
* this software, and any derivative works thereof, and its supporting
* documentation for any purpose whatsoever, provided that this entire
* notice appears in all copies of the software, derivative works and
* supporting documentation. Further, UCAR requests that the user credit
* UCAR/Unidata in any publications that result from the use of this
* software or in any product that includes this software. The names UCAR
* and/or Unidata, however, may not be used in any advertising or publicity
* to endorse or promote any products or commercial entity unless specific
* written permission is obtained from UCAR/Unidata. The user also
* understands that UCAR/Unidata is not obligated to provide the user with
* any support, consulting, training or assistance of any kind with regard
* to the use, operation and performance of this software nor to provide
* the user with any updates, revisions, new versions or "bug fixes."
*
* THIS SOFTWARE IS PROVIDED BY UCAR/UNIDATA "AS IS" AND ANY EXPRESS OR
* IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL UCAR/UNIDATA BE LIABLE FOR ANY SPECIAL,
* INDIRECT OR CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING
* FROM LOSS OF USE, DATA OR PROFITS, WHETHER IN AN ACTION OF CONTRACT,
* NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING OUT OF OR IN CONNECTION
* WITH THE ACCESS, USE OR PERFORMANCE OF THIS SOFTWARE.
*/
package ucar.nc2;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import ucar.ma2.*;
import ucar.unidata.util.test.category.NeedsCdmUnitTest;
import ucar.unidata.util.test.TestDir;
import java.io.IOException;
/**
* Describe
*
* @author caron
* @since Nov 10, 2009
*/
@Category(NeedsCdmUnitTest.class)
public class TestSequence {
@Test
public void testRead() throws IOException {
NetcdfFile ncfile = null;
try {
ncfile = NetcdfFile.open(TestDir.cdmUnitTestDir + "ft/point/200929100.ingest");
for (Variable v : ncfile.getVariables()) {
System.out.println(" " + v.getShortName() + " == " + v.getFullName());
}
Variable v = ncfile.findVariable("record");
assert v != null;
assert v instanceof Sequence;
Sequence record = (Sequence) v;
for (Variable vv : record.getVariables()) {
System.out.println(" " + vv.getShortName() + " == " + vv.getFullName());
}
Array data = v.read();
assert data != null;
assert data instanceof ArraySequence;
ArraySequence as = (ArraySequence) data;
as.getStructureDataCount();
System.out.printf(" count = %d%n", as.getStructureDataCount());
int count = 0;
StructureDataIterator iter = as.getStructureDataIterator();
try {
while (iter.hasNext()) {
StructureData sdata = iter.next();
count++;
}
} finally {
iter.finish();
}
System.out.printf(" count = %d%n", count);
int count2 = 0;
StructureDataIterator iter2 = record.getStructureIterator();
while (iter2.hasNext()) {
StructureData sdata = iter2.next();
count2++;
}
System.out.printf(" count2 = %d%n", count2);
assert count2 == count;
} finally {
if (ncfile != null) ncfile.close();
}
}
@Test
public void testReadNestedSequence() throws IOException {
NetcdfFile ncfile = null;
try {
ncfile = NetcdfFile.open(TestDir.cdmUnitTestDir + "formats/bufr/userExamples/5900.20030601.rass");
Variable v = ncfile.findVariable("obs");
assert v != null;
assert v instanceof Sequence;
Sequence record = (Sequence) v;
System.out.printf("Sequence.getVariables%n");
for (Variable vv : record.getVariables()) {
System.out.printf(" %s == %s%n", vv.getShortName(), vv.getFullName());
}
System.out.printf("%n");
Array data = v.read();
assert data instanceof ArraySequence;
ArraySequence as = (ArraySequence) data;
System.out.printf(" ArraySequence.getStructureDataCount = %d%n", as.getStructureDataCount());
System.out.printf("%n");
showArraySequence(as);
// PrintWriter pw = new PrintWriter(System.out);
int count = 0;
StructureDataIterator iter = as.getStructureDataIterator();
try {
while (iter.hasNext()) {
StructureData sdata = iter.next();
ArraySequence nested = sdata.getArraySequence("seq1");
if (count == 0) showArraySequence(nested);
count++;
StructureDataIterator nestedIter = nested.getStructureDataIterator();
try {
while (nestedIter.hasNext()) {
StructureData nestedData = nestedIter.next();
// NCdumpW.printStructureData(pw, nestedData);
assert nestedData != null;
}
} finally {
nestedIter.finish();
}
}
} finally {
iter.finish();
}
System.out.printf(" actual count = %d%n", count);
System.out.printf(" ArraySequence.getStructureDataCount = %d%n", as.getStructureDataCount());
} finally {
if (ncfile != null) ncfile.close();
}
}
private void showArraySequence(ArraySequence as) {
System.out.printf("ArraySequence.getMembers%n");
for (StructureMembers.Member m : as.getMembers()) {
System.out.printf(" %s (%s)%n", m, m.getDataType());
}
System.out.printf("%n");
}
}