/*
* Copyright 1998-2009 University Corporation for Atmospheric Research/Unidata
*
* Portions of this software were developed by the Unidata Program at the
* University Corporation for Atmospheric Research.
*
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package ucar.nc2.dataset;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import ucar.ma2.Array;
import ucar.nc2.NetcdfFile;
import ucar.nc2.Variable;
import ucar.nc2.util.CompareNetcdf2;
import ucar.unidata.util.test.category.NeedsCdmUnitTest;
import ucar.unidata.util.test.TestDir;
import java.io.File;
/**
* Test things are ok when wrapping by a Dataset
*
* @author caron
* @since 11/6/13
*/
@Category(NeedsCdmUnitTest.class)
public class TestDatasetWrap {
@Test
public void testDatasetWrap() throws Exception {
doOne(TestDir.cdmUnitTestDir + "conventions/nuwg/eta.nc");
//readAllDir( TestAll.testdataDir+ "grid/netcdf");
}
void readAllDir(String dirName) throws Exception {
System.out.println("---------------Reading directory "+dirName);
File allDir = new File( dirName);
File[] allFiles = allDir.listFiles();
for (int i = 0; i < allFiles.length; i++) {
String name = allFiles[i].getAbsolutePath();
if (name.endsWith(".nc"))
doOne(name);
}
for (int i = 0; i < allFiles.length; i++) {
File f = allFiles[i];
if (f.isDirectory())
readAllDir(allFiles[i].getAbsolutePath());
}
}
private void doOne(String filename) throws Exception {
NetcdfFile ncfile = NetcdfDataset.acquireFile(filename, null);
NetcdfDataset ncWrap = new NetcdfDataset( ncfile, true);
NetcdfDataset ncd = NetcdfDataset.acquireDataset(filename, null);
System.out.println(" dataset wraps= "+filename);
ucar.unidata.util.test.CompareNetcdf.compareFiles(ncd, ncWrap);
ncd.close();
ncWrap.close();
}
@Test
public void testMissingDataReplaced() throws Exception {
// this one has misssing longitude data, but not getting set to NaN
String filename = TestDir.cdmUnitTestDir + "/ft/point/netcdf/Surface_Synoptic_20090921_0000.nc";
NetcdfFile ncfile = null;
NetcdfDataset ds = null;
try {
ncfile = NetcdfFile.open(filename);
ds = NetcdfDataset.openDataset(filename);
String varName = "Lon";
Variable wrap = ds.findVariable(varName);
Array data_wrap = wrap.read();
boolean ok = true;
CompareNetcdf2 compare = new CompareNetcdf2();
assert wrap instanceof CoordinateAxis1D;
CoordinateAxis1D axis = (CoordinateAxis1D) wrap;
ok &= compare.compareData(varName, data_wrap, axis.getCoordValues());
assert ok;
} finally {
if (ncfile != null) ncfile.close();
if (ds != null) ds.close();
}
}
@Test
public void testLongitudeWrap() throws Exception {
// this one was getting clobbered by longitude wrapping
String filename = TestDir.cdmUnitTestDir + "/ft/profile/sonde/sgpsondewnpnC1.a1.20020507.112400.cdf";
NetcdfFile ncfile = null;
NetcdfDataset ds = null;
try {
ncfile = NetcdfFile.open(filename);
ds = NetcdfDataset.openDataset(filename);
String varName = "lon";
Variable org = ncfile.findVariable(varName);
Variable wrap = ds.findVariable(varName);
Array data_org = org.read();
Array data_wrap = wrap.read();
boolean ok;
CompareNetcdf2 compare = new CompareNetcdf2();
ok = compare.compareData(varName, data_org, data_wrap);
assert wrap instanceof CoordinateAxis1D;
CoordinateAxis1D axis = (CoordinateAxis1D) wrap;
ok &= compare.compareData(varName, data_org, axis.getCoordValues());
assert ok;
} finally {
if (ncfile != null) ncfile.close();
if (ds != null) ds.close();
}
}
}