// $Id: $
/*
* Copyright 1998-2009 University Corporation for Atmospheric Research/Unidata
*
* Portions of this software were developed by the Unidata Program at the
* University Corporation for Atmospheric Research.
*
* Access and use of this software shall impose the following obligations
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* this software, and any derivative works thereof, and its supporting
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package ucar.nc2.dataset;
import junit.framework.*;
import org.junit.experimental.categories.Category;
import ucar.ma2.Array;
import ucar.ma2.DataType;
import ucar.ma2.IndexIterator;
import ucar.ma2.InvalidRangeException;
import ucar.nc2.NCdumpW;
import ucar.nc2.NetcdfFile;
import ucar.nc2.Variable;
import ucar.nc2.constants.AxisType;
import ucar.nc2.dt.grid.GeoGrid;
import ucar.nc2.dt.grid.GridDataset;
import ucar.nc2.ncml.NcMLReader;
import ucar.unidata.util.test.category.NeedsCdmUnitTest;
import ucar.unidata.util.test.TestDir;
import java.io.IOException;
import java.io.StringReader;
/**
* Test _Coordinates dataset in the JUnit framework.
*/
public class TestCoordinates extends TestCase {
public TestCoordinates(String name) {
super(name);
}
@Category(NeedsCdmUnitTest.class)
public void testAlias() throws IOException {
String filename = TestDir.cdmUnitTestDir + "ft/grid/ensemble/demeter/MM_cnrm_129_red.ncml";
NetcdfDataset ncd = ucar.nc2.dataset.NetcdfDataset.openDataset(filename);
Variable v = ncd.findCoordinateAxis("number");
assert v != null;
//assert v.isCoordinateVariable();
assert v instanceof CoordinateAxis1D;
assert null != ncd.findDimension("ensemble");
assert v.getDimension(0) == ncd.findDimension("ensemble");
ncd.close();
}
// test offset only gets applied once
@Category(NeedsCdmUnitTest.class)
public void testWrapOnce() throws IOException {
String filename = TestDir.cdmUnitTestDir + "ncml/coords/testCoordScaling.ncml";
System.out.printf("%s%n", filename);
NetcdfDataset ncd = ucar.nc2.dataset.NetcdfDataset.openDataset(filename);
Variable v = ncd.findCoordinateAxis("Longitude");
assert v != null;
assert v instanceof CoordinateAxis1D;
// if offset is applied twice, the result is not in +-180 range
Array data = v.read();
NCdumpW.printArray(data);
IndexIterator ii = data.getIndexIterator();
while (ii.hasNext()) {
assert Math.abs(ii.getDoubleNext()) < 180 : ii.getDoubleCurrent();
}
ncd.close();
}
// from tom kunicki 1/3/11
public void testTimeUnitErrorMessage() throws IOException, InvalidRangeException {
String ncml =
"<netcdf xmlns='http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2'>\n" +
" <dimension name='time' length='2' />\n" +
" <dimension name='lat' length='3' />\n" +
" <dimension name='lon' length='4' />\n" +
" <dimension name='height' length='5' />\n" +
" <attribute name='title' value='testSimpleTZYXGrid Data' />\n" +
" <attribute name='Conventions' value='CF-1.4' />\n" +
" <variable name='rh' shape='time height lat lon' type='int'>\n" +
" <attribute name='long_name' value='relative humidity' />\n" +
" <attribute name='units' value='percent' />\n" +
" <attribute name='coordinates' value='lat lon' />\n" +
" <values start='10' increment='5' />\n" +
" </variable>\n" +
" <variable name='time' shape='time' type='int'>\n" +
" <attribute name='units' value='hours since 1970-01-01T12:00' />\n" +
" <values start='1' increment='1' />\n" +
" </variable>\n" +
" <variable name='lat' shape='lat' type='float'>\n" +
" <attribute name='units' value='degrees_north' />\n" +
" <values start='40' increment='1' />\n" +
" </variable>\n" +
" <variable name='lon' shape='lon' type='float'>\n" +
" <attribute name='units' value='degrees_east' />\n" +
" <values start='-90' increment='1' />\n" +
" </variable>\n" +
" <variable name='height' shape='height' type='float'>\n" +
" <attribute name='units' value='meters' />\n" +
" <attribute name='positive' value='up'/>\n" +
" <values start='1' increment='1' />\n" +
" </variable>\n" +
"</netcdf>";
String location = "testTimeUnitErrorMessage";
System.out.println("testTimeUnitErrorMessage=\n" + ncml);
NetcdfFile ncfile = NcMLReader.readNcML(new StringReader(ncml), location, null);
NetcdfDataset ncd = new NetcdfDataset(ncfile, true);
System.out.printf("%n%s%n", ncd);
VariableDS v = (VariableDS) ncd.findVariable("time");
assert v != null;
assert v.getDataType() == DataType.INT;
assert v instanceof CoordinateAxis;
CoordinateAxis axis = (CoordinateAxis) v;
assert axis.getAxisType() == AxisType.Time;
GridDataset gd = new GridDataset(ncd, null);
GeoGrid grid = (GeoGrid) gd.findGridByName("rh");
assert grid != null;
assert grid.getDataType() == DataType.INT;
System.out.printf("%s%n", ncd);
ncfile.close();
}
}