/*
 * Licensed to the Apache Software Foundation (ASF) under one or more
 * contributor license agreements.  See the NOTICE file distributed with
 * this work for additional information regarding copyright ownership.
 * The ASF licenses this file to You under the Apache License, Version 2.0
 * (the "License"); you may not use this file except in compliance with
 * the License. You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

package opennlp.uima.namefind;

import java.util.Collections;
import java.util.HashMap;
import java.util.LinkedList;
import java.util.List;
import java.util.Map;

import org.apache.uima.UimaContext;
import org.apache.uima.analysis_component.CasAnnotator_ImplBase;
import org.apache.uima.analysis_engine.AnalysisEngineProcessException;
import org.apache.uima.cas.CAS;
import org.apache.uima.cas.Type;
import org.apache.uima.cas.TypeSystem;
import org.apache.uima.cas.text.AnnotationFS;
import org.apache.uima.resource.ResourceInitializationException;
import org.apache.uima.util.Level;
import org.apache.uima.util.Logger;

import opennlp.tools.util.Span;
import opennlp.uima.util.AnnotationComboIterator;
import opennlp.uima.util.AnnotationIteratorPair;
import opennlp.uima.util.AnnotatorUtil;
import opennlp.uima.util.UimaUtil;

abstract class AbstractNameFinder extends CasAnnotator_ImplBase {

  protected final String name;

  protected Type mSentenceType;

  protected Type mTokenType;

  protected Type mNameType;

  protected Map<String, Type> mNameTypeMapping = Collections.emptyMap();

  protected UimaContext context;

  protected Logger mLogger;

  private Boolean isRemoveExistingAnnotations;

  AbstractNameFinder(String name) {
    this.name = name;
  }

  protected void initialize() throws ResourceInitializationException {
  }

  public final void initialize(UimaContext context) throws ResourceInitializationException {

    super.initialize(context);

    this.context = context;

    mLogger = context.getLogger();

    if (mLogger.isLoggable(Level.INFO)) {
      mLogger.log(Level.INFO, "Initializing the " + name + ".");
    }

    isRemoveExistingAnnotations = AnnotatorUtil.getOptionalBooleanParameter(
        context, UimaUtil.IS_REMOVE_EXISTINGS_ANNOTAIONS);

    if (isRemoveExistingAnnotations == null) {
      isRemoveExistingAnnotations = false;
    }

    initialize();
  }

  /**
   * Initializes the type system.
   */
  public void typeSystemInit(TypeSystem typeSystem)
      throws AnalysisEngineProcessException {

    // sentence type
    mSentenceType = AnnotatorUtil.getRequiredTypeParameter(context, typeSystem,
        UimaUtil.SENTENCE_TYPE_PARAMETER);

    // token type
    mTokenType = AnnotatorUtil.getRequiredTypeParameter(context, typeSystem,
        UimaUtil.TOKEN_TYPE_PARAMETER);

    // name type
    mNameType = AnnotatorUtil.getOptionalTypeParameter(context, typeSystem,
        NameFinder.NAME_TYPE_PARAMETER);

    String typeMapString = (String) context.getConfigParameterValue(
            NameFinder.NAME_TYPE_MAP_PARAMETER);

    if (typeMapString != null) {
      Map<String, Type> nameTypeMap = new HashMap<>();

      String[] mappings = typeMapString.split(",");

      for (String mapping : mappings) {
        String[] parts = mapping.split(":");

        if (parts.length == 2) {
          nameTypeMap.put(parts[0].trim(), typeSystem.getType(parts[1].trim()));
        }
        else {
          mLogger.log(Level.WARNING,
              String.format("Failed to parse a part of the type mapping [%s]", mapping));
        }
      }

      mNameTypeMapping = Collections.unmodifiableMap(nameTypeMap);
    }

    if (mNameType == null && mNameTypeMapping.size() == 0) {
      throw new AnalysisEngineProcessException(
          new Exception("No name type or valid name type mapping configured!"));
    }
  }

  protected void postProcessAnnotations(Span[] detectedNames,
      AnnotationFS[] nameAnnotations) {
  }

  /**
   * Called if the current document is completely processed.
   */
  protected void documentDone(CAS cas) {
  }

  protected abstract Span[] find(CAS cas, String[] tokens);

  /**
   * Performs name finding on the given cas object.
   */
  public final void process(CAS cas) {

    if (isRemoveExistingAnnotations) {
      final AnnotationComboIterator sentenceNameCombo = new AnnotationComboIterator(cas,
          mSentenceType, mNameType);

      List<AnnotationFS> removeAnnotations = new LinkedList<>();
      for (AnnotationIteratorPair annotationIteratorPair : sentenceNameCombo) {
        for (AnnotationFS nameAnnotation : annotationIteratorPair.getSubIterator()) {
          removeAnnotations.add(nameAnnotation);
        }
      }

      for (AnnotationFS annotation : removeAnnotations) {
        cas.removeFsFromIndexes(annotation);
      }
    }

    final AnnotationComboIterator sentenceTokenCombo = new AnnotationComboIterator(cas,
        mSentenceType, mTokenType);

    for (AnnotationIteratorPair annotationIteratorPair : sentenceTokenCombo) {

      final List<AnnotationFS> sentenceTokenAnnotationList = new LinkedList<>();

      final List<String> sentenceTokenList = new LinkedList<>();

      for (AnnotationFS tokenAnnotation : annotationIteratorPair.getSubIterator()) {

        sentenceTokenAnnotationList.add(tokenAnnotation);

        sentenceTokenList.add(tokenAnnotation.getCoveredText());
      }

      Span[] names  = find(cas,
          sentenceTokenList.toArray(new String[sentenceTokenList.size()]));

      AnnotationFS[] nameAnnotations = new AnnotationFS[names.length];

      for (int i = 0; i < names.length; i++) {

        int startIndex = sentenceTokenAnnotationList.get(
            names[i].getStart()).getBegin();

        int endIndex = sentenceTokenAnnotationList.get(
            names[i].getEnd() - 1).getEnd();

        Type nameType = mNameTypeMapping.get(names[i].getType());

        if (nameType == null) {
          nameType = mNameType;
        }

        // Types in the model which are not mapped should be ignored,
        // this allows the usage of only some types in the model
        if (nameType != null) {
          nameAnnotations[i] = cas.createAnnotation(nameType, startIndex, endIndex);
          cas.getIndexRepository().addFS(nameAnnotations[i]);
        }
      }

      postProcessAnnotations(names, nameAnnotations);
    }

    documentDone(cas);
  }
}