/*
* This file is part of JGrasstools (http://www.jgrasstools.org)
* (C) HydroloGIS - www.hydrologis.com
*
* JGrasstools is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
package org.jgrasstools.gears.io.timeseries;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_AUTHORCONTACTS;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_AUTHORNAMES;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_DESCRIPTION;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_DOCUMENTATION;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_KEYWORDS;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_LABEL;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_LICENSE;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_NAME;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_STATUS;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_FILE_NOVALUE_DESCRIPTION;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_FILE_DESCRIPTION;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_NOVALUE_DESCRIPTION;
import static org.jgrasstools.gears.i18n.GearsMessages.OMSTIMESERIESREADER_OUT_DATA_DESCRIPTION;
import java.io.File;
import java.io.IOException;
import java.util.HashMap;
import java.util.LinkedHashMap;
import oms3.annotations.Author;
import oms3.annotations.Description;
import oms3.annotations.Documentation;
import oms3.annotations.Execute;
import oms3.annotations.Finalize;
import oms3.annotations.In;
import oms3.annotations.Keywords;
import oms3.annotations.Label;
import oms3.annotations.License;
import oms3.annotations.Name;
import oms3.annotations.Out;
import oms3.annotations.Status;
import oms3.annotations.UI;
import oms3.io.CSTable;
import oms3.io.DataIO;
import oms3.io.TableIterator;
import org.jgrasstools.gears.libs.modules.JGTConstants;
import org.jgrasstools.gears.libs.modules.JGTModel;
import org.joda.time.DateTime;
import org.joda.time.format.DateTimeFormatter;
@Description(OMSTIMESERIESREADER_DESCRIPTION)
@Documentation(OMSTIMESERIESREADER_DOCUMENTATION)
@Author(name = OMSTIMESERIESREADER_AUTHORNAMES, contact = OMSTIMESERIESREADER_AUTHORCONTACTS)
@Keywords(OMSTIMESERIESREADER_KEYWORDS)
@Label(OMSTIMESERIESREADER_LABEL)
@Name(OMSTIMESERIESREADER_NAME)
@Status(OMSTIMESERIESREADER_STATUS)
@License(OMSTIMESERIESREADER_LICENSE)
public class OmsTimeSeriesReader extends JGTModel {
@Description(OMSTIMESERIESREADER_FILE_DESCRIPTION)
@UI(JGTConstants.FILEIN_UI_HINT)
@In
public String file = null;
@Description(OMSTIMESERIESREADER_FILE_NOVALUE_DESCRIPTION)
@In
public String fileNovalue = "-9999.0";
@Description(OMSTIMESERIESREADER_NOVALUE_DESCRIPTION)
@In
public double novalue = JGTConstants.doubleNovalue;
@Description(OMSTIMESERIESREADER_OUT_DATA_DESCRIPTION)
@Out
public HashMap<DateTime, double[]> outData;
private TableIterator<String[]> rowsIterator;
private CSTable table;
private DateTimeFormatter formatter = JGTConstants.utcDateFormatterYYYYMMDDHHMM;
private void ensureOpen() throws IOException {
if (table == null) {
table = DataIO.table(new File(file), null);
rowsIterator = (TableIterator<String[]>) table.rows().iterator();
outData = new LinkedHashMap<DateTime, double[]>();
}
}
@Execute
public void read() throws IOException {
ensureOpen();
while( rowsIterator.hasNext() ) {
String[] row = rowsIterator.next();
double[] record = new double[row.length - 2];
for( int i = 2; i < row.length; i++ ) {
double value = -1;
if (row[i] == null || row[i].length() == 0) {
value = novalue;
} else {
String valueStr = row[i];
if (valueStr.trim().equals(fileNovalue)) {
value = novalue;
} else {
value = Double.parseDouble(valueStr);
}
}
record[i - 2] = value;
}
outData.put(formatter.parseDateTime(row[1]), record);
}
}
@Finalize
public void close() throws IOException {
rowsIterator.close();
}
}