/* * BioJava development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public Licence. This should * be distributed with the code. If you do not have a copy, * see: * * http://www.gnu.org/copyleft/lesser.html * * Copyright for this code is held jointly by the individual * authors. These should be listed in @author doc comments. * * For more information on the BioJava project and its aims, * or to join the biojava-l mailing list, visit the home page * at: * * http://www.biojava.org/ * * Author: Daniel Asarnow * Date: 2012-6-23 */ package org.biojava.nbio.structure.cath; import java.io.Serializable; /** Represents a node in the CATH hierarchy. * * @author Daniel Asarnow */ public class CathNode implements Serializable{ public static final long serialVersionUID = 1L; /** * The CATH code of the node, e.g. "1.10.8.10". */ String nodeId; /** * The CATH code of the parent, e.g. "1.10.8". Calculated during parsing. */ String parentId; /** * The representative domain for this node. */ String representative; /** * A name or description. */ String description; /** * This node's level within the hierarchy. One of CATH, not CATHSOLID. */ CathCategory category; public String getNodeId() { return nodeId; } public void setNodeId(String nodeId) { this.nodeId = nodeId; this.category = CathCategory.fromCathCode(nodeId); } public String getParentId() { return parentId; } public void setParentId(String parentId) { this.parentId = parentId; } public String getRepresentative() { return representative; } public void setRepresentative(String representative) { this.representative = representative; } public String getDescription() { return description; } public void setDescription(String description) { this.description = description; } public CathCategory getCategory() { return category; } @Override public String toString() { return ""; //TODO implement } }