/************************************************************************* * * * This file is part of the 20n/act project. * * 20n/act enables DNA prediction for synthetic biology/bioengineering. * * Copyright (C) 2017 20n Labs, Inc. * * * * Please direct all queries to act@20n.com. * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU General Public License as published by * * the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program. If not, see <http://www.gnu.org/licenses/>. * * * *************************************************************************/ package com.act.biointerpretation.mechanisminspection; import org.junit.Test; import java.util.stream.Collectors; import static org.junit.Assert.assertEquals; public class ErosCorpusTest { @Test public void filterCorpusBySubstrateCount() throws Exception { ErosCorpus fullCorpus = new ErosCorpus(); fullCorpus.loadValidationCorpus(); ErosCorpus corpusOneSubstrate = new ErosCorpus(); corpusOneSubstrate.loadValidationCorpus(); corpusOneSubstrate.filterCorpusBySubstrateCount(1); assertEquals("One substrate ERO lists match in size", fullCorpus.getRos().stream(). filter(ero -> ero.getSubstrate_count().equals(1)).collect(Collectors.toList()).size(), corpusOneSubstrate.getRos().size() ); assertEquals("Re-filtering substrate count filtered eros yields same list", corpusOneSubstrate.getRos().stream(). filter(ero -> ero.getSubstrate_count().equals(1)).collect(Collectors.toList()), corpusOneSubstrate.getRos() ); ErosCorpus corpusTwoSubstrates = new ErosCorpus(); corpusTwoSubstrates.loadValidationCorpus(); corpusTwoSubstrates.filterCorpusBySubstrateCount(2); assertEquals("Two substrates ERO lists match in size", fullCorpus.getRos().stream(). filter(ero -> ero.getSubstrate_count().equals(2)).collect(Collectors.toList()).size(), corpusTwoSubstrates.getRos().size() ); assertEquals("Re-filtering substrate count filtered eros yields same list", corpusTwoSubstrates.getRos().stream(). filter(ero -> ero.getSubstrate_count().equals(2)).collect(Collectors.toList()), corpusTwoSubstrates.getRos() ); } }