/*************************************************************************
* *
* This file is part of the 20n/act project. *
* 20n/act enables DNA prediction for synthetic biology/bioengineering. *
* Copyright (C) 2017 20n Labs, Inc. *
* *
* Please direct all queries to act@20n.com. *
* *
* This program is free software: you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation, either version 3 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program. If not, see <http://www.gnu.org/licenses/>. *
* *
*************************************************************************/
package act.installer.metacyc.references;
import act.installer.metacyc.Resource;
import act.installer.metacyc.BPElement;
import java.util.Set;
public class Publication extends BPElement {
Integer year;
String title;
Set<String> source;
String db, id;
Set<String> authors;
// an example (xml, but jsonified for readability, so please ignore the multikey) being:
// { year: 2004,
// title: "A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases."
// source: "BMC Bioinformatics 5;76"
// id: "15189570"
// db: "PubMed"
// author: "Green ML"
// author: "Karp PD"
// }
public Publication(BPElement basics, int year, String t, Set<String> src, String db, String id, Set<String> auth) {
super(basics);
this.year = year;
this.title = t;
this.source = src;
this.db = db;
this.id = id;
this.authors = auth;
}
public String citation() {
return "\"" + title + "\", " + source + ", " + year + ", " + authors;
}
public String dbid() {
return db + "_" + id;
}
}