/************************************************************************* * * * This file is part of the 20n/act project. * * 20n/act enables DNA prediction for synthetic biology/bioengineering. * * Copyright (C) 2017 20n Labs, Inc. * * * * Please direct all queries to act@20n.com. * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU General Public License as published by * * the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program. If not, see <http://www.gnu.org/licenses/>. * * * *************************************************************************/ package com.act.biointerpretation.sars; import java.util.List; public interface ReactionGroupCharacterizer { /** * Generates a SAR for the given ReactionGroup, if possible. If a SAR can be generated, * return CharacterizedGroup containing the ReactionGroup, the SAR, and the ROs associated. * * @param group The seq group to characterize. * @return The corresponding SAR, if one could be generated, or empty. */ List<CharacterizedGroup> characterizeGroup(ReactionGroup group); }