/*************************************************************************
* *
* This file is part of the 20n/act project. *
* 20n/act enables DNA prediction for synthetic biology/bioengineering. *
* Copyright (C) 2017 20n Labs, Inc. *
* *
* Please direct all queries to act@20n.com. *
* *
* This program is free software: you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation, either version 3 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program. If not, see <http://www.gnu.org/licenses/>. *
* *
*************************************************************************/
#if (${PACKAGE_NAME} && ${PACKAGE_NAME} != "") package ${PACKAGE_NAME};#end
import org.apache.commons.cli.CommandLine;
import org.apache.commons.cli.CommandLineParser;
import org.apache.commons.cli.DefaultParser;
import org.apache.commons.cli.HelpFormatter;
import org.apache.commons.cli.Option;
import org.apache.commons.cli.Options;
import org.apache.commons.cli.ParseException;
import org.apache.commons.lang.StringUtils;
import org.apache.logging.log4j.LogManager;
import org.apache.logging.log4j.Logger;
import java.util.ArrayList;
import java.util.List;
public class ${NAME} {
private static final Logger LOGGER = LogManager.getFormatterLogger(${NAME}.class);
private static final String OPTION_VAL = "p";
public static final String HELP_MESSAGE = StringUtils.join(new String[]{
"FILL_OUT ",
"FILL_OUT"}, "");
public static final List<Option.Builder> OPTION_BUILDERS = new ArrayList<Option.Builder>() {
{
add(Option.builder(OPTION_VAL)
.argName("FILL_OUT")
.desc("FILL_OUT")
.hasArg()
.longOpt("FILL_OUT")
.required()
);
}
};
public static final HelpFormatter HELP_FORMATTER = new HelpFormatter();
static {
HELP_FORMATTER.setWidth(100);
}
public static void main(String[] args) {
Options opts = new Options();
for (Option.Builder b : OPTION_BUILDERS) {
opts.addOption(b.build());
}
CommandLine cl = null;
try {
CommandLineParser parser = new DefaultParser();
cl = parser.parse(opts, args);
} catch (ParseException e) {
LOGGER.error("Argument parsing failed: %s", e.getMessage());
HELP_FORMATTER.printHelp(${NAME}.class.getCanonicalName(), HELP_MESSAGE, opts, null, true);
System.exit(1);
}
if (cl.hasOption("help")) {
HELP_FORMATTER.printHelp(${NAME}.class.getCanonicalName(), HELP_MESSAGE, opts, null, true);
System.exit(1);
}
}
}