/************************************************************************* * * * This file is part of the 20n/act project. * * 20n/act enables DNA prediction for synthetic biology/bioengineering. * * Copyright (C) 2017 20n Labs, Inc. * * * * Please direct all queries to act@20n.com. * * * * This program is free software: you can redistribute it and/or modify * * it under the terms of the GNU General Public License as published by * * the Free Software Foundation, either version 3 of the License, or * * (at your option) any later version. * * * * This program is distributed in the hope that it will be useful, * * but WITHOUT ANY WARRANTY; without even the implied warranty of * * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * * GNU General Public License for more details. * * * * You should have received a copy of the GNU General Public License * * along with this program. If not, see <http://www.gnu.org/licenses/>. * * * *************************************************************************/ package act.installer.metacyc.processes; import act.installer.metacyc.Resource; import act.installer.metacyc.BPElement; import java.util.List; import java.util.Set; public class Pathway extends BPElement { Set<Resource> order; // the order in which the components appear, a set of PathwayStep // resources. These resources have a getNextStep() function that // returns a Set<PathwayStep> allowing one to traverse an acyclic g Set<Resource> components; // catalysis or biochemicalreaction public Pathway(BPElement basics, Set<Resource> order, Set<Resource> components) { super(basics); this.order = order; this.components = components; } }