InputReader.java

package statalign.io.input;

import java.io.*;

//mport statalign.base.MCMCPars;
//import statalign.base.Mcmc;
//import statalign.base.Tree;
//import statalign.model.score.plugins.Blosum62;
//import statalign.postprocess.PostprocessManager;

/**
 * Deprecated class for testing purposes. It is actually empty. 
 * 
 * If you uncomment the main function,
 * set the appropriate Tree constructor public. 
 */
public class InputReader{

	/**
	 * useage: java InputReader input_file_name burnin cycles sampling
	 */
	public static void main(String[] args) throws IOException{
	//	Tree tree = new Tree(new File(args[0]),
	//			new Blosum62());
	//	Mcmc mcmc = new Mcmc(tree, new MCMCPars(Integer.parseInt(args[1]), Integer.parseInt(args[2]), Integer.parseInt(args[3])), new PostprocessManager(null));
	//	mcmc.doMCMC();

	}

}