Base.java

/*
 VARNA is a tool for the automated drawing, visualization and annotation of the secondary structure of RNA, designed as a companion software for web servers and databases.
 Copyright (C) 2008  Kevin Darty, Alain Denise and Yann Ponty.
 electronic mail : Yann.Ponty@lri.fr
 paper mail : LRI, bat 490 University Paris-Sud 91405 Orsay Cedex France

 This file is part of VARNA version 3.1.
 VARNA version 3.1 is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License
 as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.

 VARNA version 3.1 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
 without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 See the GNU General Public License for more details.

 You should have received a copy of the GNU General Public License along with VARNA version 3.1.
 If not, see http://www.gnu.org/licenses.
 */
package fr.orsay.lri.varna.models.naView;

public class Base {
	private int mate;
	private double x, y;
	private boolean extracted;
	private Region region = new Region();

	public int getMate() {
		return mate;
	}

	public void setMate(int mate) {
		this.mate = mate;
	}

	public double getX() {
		return x;
	}

	public void setX(double x) {
		//System.out.println("  Base.setX()");
		this.x = x;
	}

	public double getY() {
		return y;
	}

	public void setY(double y) {
		this.y = y;
	}

	public boolean isExtracted() {
		return extracted;
	}

	public void setExtracted(boolean extracted) {
		this.extracted = extracted;
	}

	public Region getRegion() {
		return region;
	}

	public void setRegion(Region region) {
		this.region = region;
	}
}