/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ /* * To change this template, choose Tools | Templates * and open the template in the editor. */ package org.broad.igv.util; import java.util.Iterator; import java.util.LinkedHashSet; import java.util.List; /** * @author eflakes */ abstract public class Filter { private String name; private LinkedHashSet<FilterElement> elements = new LinkedHashSet<FilterElement>(); private boolean isEnabled = true; public Filter(String name, List<? extends FilterElement> elements) { this.name = name; if (elements != null) { this.elements.addAll(elements); } } public void removeAll() { elements.clear(); } public void setEnabled(boolean value) { isEnabled = value; } public boolean isEnabled() { return isEnabled; } public boolean isEmpty() { return elements.isEmpty(); } public Iterator getFilterElements() { return elements.iterator(); } public void add(FilterElement element) { elements.add(element); } public void remove(FilterElement element) { elements.remove(element); } /** * Evaluate the FilterElement set. * * @return */ abstract protected void evaluate(); public String getName() { return name; } }