/*
* The MIT License (MIT)
*
* Copyright (c) 2007-2015 Broad Institute
*
* Permission is hereby granted, free of charge, to any person obtaining a copy
* of this software and associated documentation files (the "Software"), to deal
* in the Software without restriction, including without limitation the rights
* to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
* copies of the Software, and to permit persons to whom the Software is
* furnished to do so, subject to the following conditions:
*
* The above copyright notice and this permission notice shall be included in
* all copies or substantial portions of the Software.
*
*
* THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
* IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
* FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
* AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
* LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
* OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
* THE SOFTWARE.
*/
package org.broad.igv.ui.action;
import org.apache.log4j.Logger;
import org.broad.igv.batch.BatchRunner;
import org.broad.igv.prefs.PreferencesManager;
import org.broad.igv.ui.IGV;
import org.broad.igv.ui.util.FileDialogUtils;
import javax.swing.*;
import java.awt.*;
import java.awt.event.ActionEvent;
import java.io.File;
public class RunScriptMenuAction extends MenuAction {
static Logger log = Logger.getLogger(LoadFilesMenuAction.class);
IGV mainFrame;
public RunScriptMenuAction(String label, int mnemonic, IGV mainFrame) {
super(label, null, mnemonic);
this.mainFrame = mainFrame;
}
public void actionPerformed(ActionEvent e) {
if (e.getActionCommand().equalsIgnoreCase("run batch script...")) {
File script = chooseScriptFile();
if (script != null && script.isFile()) {
final BatchRunner bRun = new BatchRunner(script.getPath());
SwingWorker worker = new SwingWorker() {
@Override
protected Object doInBackground() throws Exception {
bRun.run();
return null;
}
};
worker.execute();
}
}
}
private File chooseScriptFile() {
File lastDirectoryFile = PreferencesManager.getPreferences().getLastTrackDirectory();
File scriptFile = FileDialogUtils.chooseFile("Select Script", lastDirectoryFile, FileDialog.LOAD);
if (scriptFile != null) {
// Store the last accessed file location
PreferencesManager.getPreferences().setLastTrackDirectory(scriptFile.getParentFile());
}
mainFrame.resetStatusMessage();
return scriptFile;
}
}