/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.ui.action; import org.apache.log4j.Logger; import org.broad.igv.batch.BatchRunner; import org.broad.igv.prefs.PreferencesManager; import org.broad.igv.ui.IGV; import org.broad.igv.ui.util.FileDialogUtils; import javax.swing.*; import java.awt.*; import java.awt.event.ActionEvent; import java.io.File; public class RunScriptMenuAction extends MenuAction { static Logger log = Logger.getLogger(LoadFilesMenuAction.class); IGV mainFrame; public RunScriptMenuAction(String label, int mnemonic, IGV mainFrame) { super(label, null, mnemonic); this.mainFrame = mainFrame; } public void actionPerformed(ActionEvent e) { if (e.getActionCommand().equalsIgnoreCase("run batch script...")) { File script = chooseScriptFile(); if (script != null && script.isFile()) { final BatchRunner bRun = new BatchRunner(script.getPath()); SwingWorker worker = new SwingWorker() { @Override protected Object doInBackground() throws Exception { bRun.run(); return null; } }; worker.execute(); } } } private File chooseScriptFile() { File lastDirectoryFile = PreferencesManager.getPreferences().getLastTrackDirectory(); File scriptFile = FileDialogUtils.chooseFile("Select Script", lastDirectoryFile, FileDialog.LOAD); if (scriptFile != null) { // Store the last accessed file location PreferencesManager.getPreferences().setLastTrackDirectory(scriptFile.getParentFile()); } mainFrame.resetStatusMessage(); return scriptFile; } }