/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.cli_plugin; import java.util.List; import java.util.Map; /** * Interface common for writing Features out and in * * @author jacob * @since 2012-Oct-18 */ interface PluginArguments { /** * It may be the case that the output is processed differently, depending on the input. * We allow for that by providing the commands and arguments here. Implementations are not * required to do anything with the input * * @param commands Command portions of the input, e.g. {"find", "."} * @param argumentMap Arguments with their values. e.g. "-name", "myFile" * @param argument Argument for which this instance was instantiated. For example, * this might be a FEATURE_TRACK argument. The track could be retrieved * with argumentMap.get(argument) */ void setInputs(List<String> commands, Map<Argument, Object> argumentMap, Argument argument); }