// $Id: NcSDCharArray.java,v 1.3 2004-02-06 15:23:49 donm Exp $ /* * Copyright 1997-2000 Unidata Program Center/University Corporation for * Atmospheric Research, P.O. Box 3000, Boulder, CO 80307, * support@unidata.ucar.edu. * * This library is free software; you can redistribute it and/or modify it * under the terms of the GNU Lesser General Public License as published by * the Free Software Foundation; either version 2.1 of the License, or (at * your option) any later version. * * This library is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser * General Public License for more details. * * You should have received a copy of the GNU Lesser General Public License * along with this library; if not, write to the Free Software Foundation, * Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA */ package dods.servers.netcdf; import ucar.ma2.*; import ucar.nc2.*; import dods.dap.Server.*; import dods.dap.*; import dods.servers.agg.HasProxyObject; import java.io.IOException; import java.io.EOFException; import java.util.*; /** * Wraps a netcdf char variable with rank > 1 as an SDArray. * * @version $Revision: 1.3 $ * @author jcaron */ public class NcSDCharArray extends SDArray implements HasProxyObject { private boolean debug = false, debugRead = false, debugReadDetail = false; private Variable ncVar = null; private int strLen = 1; /** * Constructor: Wraps a netcdf char variable (rank > 1) in a DODS SDArray. * @param v: netcdf Variable * @param bt: DODS element type */ NcSDCharArray(Variable v) { super(v.getName()); this.ncVar = v; if (v.getRank() < 1) throw new IllegalArgumentException("NcSDCharArray: rank must be > 1, var = "+v.getName()); // set dimensions, eliminate last one ArrayList dims = v.getDimensions(); for (int i=0; i< dims.size(); i++) { Dimension dim = (Dimension) dims.get(i); if (i < dims.size()-1) appendDim(dim.getLength(), dim.getName()); else strLen = dim.getLength(); } // set String type addVariable( new NcSDString(v.getName(), null)); } /** get/set the underlying proxy */ public void setProxy(Object v) { this.ncVar = (Variable) v; } public Object getProxy() { return ncVar; } /** Read the data values (parameters are ignored). * Use the start, stop and stride values that were set by the constraint evaluator. * @param datasetName not used * @param specialO not used * @return false (no more data to be read) * @exception IOException * @exception EOFException */ public boolean read(String datasetName, Object specialO) throws IOException, EOFException { boolean hasStride = false; ArrayAbstract a; try { if (debugRead) { System.out.println("NcSDCharArray read "+ncVar.getName()); for (int i=0; i < numDimensions(); i++) { DArrayDimension d = getDimension(i); System.out.println(" "+d.getName()+" "+getStart(i)+" "+getStop(i)+" "+getStride(i)); } } // set up the netcdf read int n = numDimensions(); int[] origin = new int[n+1]; int[] shape = new int[n+1]; for (int i=0; i<n; i++) { origin[i] = getStart(i); shape[i] = getStop(i) - getStart(i) + 1; hasStride = hasStride && (getStride(i) > 1); } origin[n] = 0; shape[n] = strLen; a = (ArrayAbstract) ncVar.read(origin, shape); if (debugRead) System.out.println(" Read = "+ a.getSize()+" elems of type = "+a.getElementType()); // deal with strides using a section if (hasStride) { Range[] r = new Range[n+1]; for (int i=0; i<n; i++) { int s = getStride(i); if (s > 1) { // otherwise null, means "take all elements" r[i] = new Range(0, shape[i], s); if (debugRead) System.out.println(" Section dim "+i+" stride = "+s); } } r[n] = null; // get all a = (ArrayAbstract) a.section(r); if (debugRead) System.out.println(" section size "+a.getSize()); } } catch (InvalidParameterException e) { System.out.println(e); e.printStackTrace(); throw new IllegalStateException("NcSDCharArray InvalidParameterException"); } catch (InvalidRangeException e) { System.out.println(e); e.printStackTrace(); throw new IllegalStateException("NcSDCharArray InvalidRangeException"); } PrimitiveVector pv = getPrimitiveVector(); if (debugRead) System.out.println(" PrimitiveVector type = "+pv.getTemplate()+ " pv type = "+pv.getClass().getName()); // this is the case of netcdf char arrays with rank > 1; // these become DODS Arrays of Strings ArrayChar ca = (ArrayChar) a; ArrayChar.StringIterator siter = ca.getStringIterator(); int nelems = siter.getNumElems(); if (debugRead) System.out.println(" set Strings = "+nelems); BaseTypePrimitiveVector btpv = (BaseTypePrimitiveVector) pv; btpv.setLength( nelems); for (int i=0; i<nelems; i++) { String val = siter.next(); NcSDString ds = new NcSDString("", val); btpv.setValue( i, ds); if (debugReadDetail) System.out.println(" s = "+val+" == "+ds.getValue()); } if (debugRead) System.out.println(" PrimitiveVector len = "+pv.getLength()+" type = "+pv.getTemplate()); setRead(true); return (false); } } /* Change History: $Log: not supported by cvs2svn $ Revision 1.1.1.1 2001/09/26 15:34:30 caron checkin beta1 */