/* * RapidMiner * * Copyright (C) 2001-2008 by Rapid-I and the contributors * * Complete list of developers available at our web site: * * http://rapid-i.com * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see http://www.gnu.org/licenses/. */ package com.rapidminer.operator.preprocessing.sampling; import java.util.Arrays; import java.util.Iterator; import java.util.LinkedList; import java.util.List; import com.rapidminer.example.Attribute; import com.rapidminer.example.AttributeRole; import com.rapidminer.example.Example; import com.rapidminer.example.ExampleSet; import com.rapidminer.example.Statistics; import com.rapidminer.example.Tools; import com.rapidminer.example.set.SimpleExampleSet; import com.rapidminer.example.table.DataRow; import com.rapidminer.example.table.DoubleArrayDataRow; import com.rapidminer.example.table.ExampleTable; import com.rapidminer.example.table.ListDataRowReader; import com.rapidminer.example.table.MemoryExampleTable; import com.rapidminer.operator.IOObject; import com.rapidminer.operator.Operator; import com.rapidminer.operator.OperatorDescription; import com.rapidminer.operator.OperatorException; import com.rapidminer.operator.learner.meta.WeightedPerformanceMeasures; import com.rapidminer.parameter.ParameterType; import com.rapidminer.parameter.ParameterTypeInt; import com.rapidminer.tools.RandomGenerator; /** * Sampling based on a learned model. * * @see com.rapidminer.operator.learner.meta.BayesianBoosting * @author Martin Scholz, Ingo Mierswa * @version $Id: ModelBasedSampling.java,v 1.14 2006/04/05 08:57:27 ingomierswa * Exp $ */ public class ModelBasedSampling extends Operator { /** The parameter name for "Use the given random seed instead of global random numbers (-1: use global)." */ public static final String PARAMETER_LOCAL_RANDOM_SEED = "local_random_seed"; public ModelBasedSampling(OperatorDescription description) { super(description); } public IOObject[] apply() throws OperatorException { ExampleSet exampleSet = getInput(ExampleSet.class); Attribute weightAttr = exampleSet.getAttributes().getWeight(); if (weightAttr == null) { weightAttr = Tools.createWeightAttribute(exampleSet); Iterator<Example> reader = exampleSet.iterator(); while (reader.hasNext()) { reader.next().setValue(weightAttr, 1.0d); } } WeightedPerformanceMeasures wp = new WeightedPerformanceMeasures(exampleSet); WeightedPerformanceMeasures.reweightExamples(exampleSet, wp.getContingencyMatrix(), true); // recalc weight att statistics exampleSet.recalculateAttributeStatistics(exampleSet.getAttributes().getWeight()); // fill new table Attribute[] allAttributes = exampleSet.getExampleTable().getAttributes(); List<DataRow> dataList = new LinkedList<DataRow>(); Iterator<Example> reader = exampleSet.iterator(); double maxWeight = exampleSet.getStatistics(exampleSet.getAttributes().getWeight(), Statistics.MAXIMUM); while (reader.hasNext()) { Example example = reader.next(); if (RandomGenerator.getRandomGenerator(getParameterAsInt(PARAMETER_LOCAL_RANDOM_SEED)).nextDouble() > example.getValue(weightAttr) / maxWeight) { example.setValue(weightAttr, 1.0d); double[] values = new double[allAttributes.length]; for (int i = 0; i < values.length; i++) values[i] = example.getValue(allAttributes[i]); dataList.add(new DoubleArrayDataRow(values)); } checkForStop(); } List<Attribute> attributes = Arrays.asList(allAttributes); ExampleTable exampleTable = new MemoryExampleTable(attributes, new ListDataRowReader(dataList.iterator())); // regular attributes. List<Attribute> regularAttributes = new LinkedList<Attribute>(); for (Attribute attribute : exampleSet.getAttributes()) { regularAttributes.add(attribute); } // special attributes ExampleSet result = new SimpleExampleSet(exampleTable, regularAttributes); Iterator<AttributeRole> special = exampleSet.getAttributes().specialAttributes(); while (special.hasNext()) { AttributeRole role = special.next(); result.getAttributes().setSpecialAttribute(role.getAttribute(), role.getSpecialName()); } return new IOObject[] { result }; } public Class<?>[] getInputClasses() { return new Class[] { ExampleSet.class }; } public Class<?>[] getOutputClasses() { return new Class[] { ExampleSet.class }; } public List<ParameterType> getParameterTypes() { List<ParameterType> types = super.getParameterTypes(); types.add(new ParameterTypeInt(PARAMETER_LOCAL_RANDOM_SEED, "Use the given random seed instead of global random numbers (-1: use global).", -1, Integer.MAX_VALUE, -1)); return types; } }