/* * RapidMiner * * Copyright (C) 2001-2008 by Rapid-I and the contributors * * Complete list of developers available at our web site: * * http://rapid-i.com * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see http://www.gnu.org/licenses/. */ package com.rapidminer.operator.features.weighting; import java.util.List; import com.rapidminer.example.Attribute; import com.rapidminer.example.AttributeWeights; import com.rapidminer.example.Example; import com.rapidminer.example.ExampleSet; import com.rapidminer.operator.IOContainer; import com.rapidminer.operator.IOObject; import com.rapidminer.operator.Operator; import com.rapidminer.operator.OperatorCreationException; import com.rapidminer.operator.OperatorDescription; import com.rapidminer.operator.OperatorException; import com.rapidminer.operator.UserError; import com.rapidminer.operator.preprocessing.discretization.BinDiscretization; import com.rapidminer.parameter.ParameterType; import com.rapidminer.parameter.ParameterTypeInt; import com.rapidminer.tools.OperatorService; import com.rapidminer.tools.math.ContingencyTableTools; /** * This operator calculates the relevance of a feature by computing * for each attribute of the input example set the value of the * chi-squared statistic with respect to the class attribute. * * @author Ingo Mierswa * @version $Id: ChiSquaredWeighting.java,v 1.6 2008/05/09 19:23:22 ingomierswa Exp $ */ public class ChiSquaredWeighting extends AbstractWeighting { public ChiSquaredWeighting(OperatorDescription description) { super(description); } public AttributeWeights calculateWeights(ExampleSet exampleSet) throws OperatorException { Attribute label = exampleSet.getAttributes().getLabel(); if (!label.isNominal()) { throw new UserError(this, 101, "chi squared test", label.getName()); } Operator discretization = null; try { discretization = OperatorService.createOperator(BinDiscretization.class); } catch (OperatorCreationException e) { throw new UserError(this, 904, "Discretization", e.getMessage()); } int numberOfBins = getParameterAsInt(BinDiscretization.PARAMETER_NUMBER_OF_BINS); discretization.setParameter(BinDiscretization.PARAMETER_NUMBER_OF_BINS, numberOfBins + ""); IOContainer ioContainer = new IOContainer(new IOObject[] { exampleSet }); ioContainer = discretization.apply(ioContainer); exampleSet = ioContainer.get(ExampleSet.class); // init double[][][] counters = new double[exampleSet.getAttributes().size()][numberOfBins][label.getMapping().size()]; Attribute weightAttribute = exampleSet.getAttributes().getWeight(); // count int exampleCounter = 0; double[] temporaryCounters = new double[label.getMapping().size()]; for (Example example : exampleSet) { double weight = 1.0d; if (weightAttribute != null) { weight = example.getValue(weightAttribute); } int labelIndex = (int)example.getLabel(); temporaryCounters[labelIndex] += weight; exampleCounter++; } for (int k = 0; k < counters.length; k++) { for (int i = 0; i < temporaryCounters.length; i++) { counters[k][0][i] = temporaryCounters[i]; } } // attribute counts for (Example example : exampleSet) { int labelIndex = (int)example.getLabel(); double weight = 1.0d; if (weightAttribute != null) { weight = example.getValue(weightAttribute); } int attributeCounter = 0; for (Attribute attribute : exampleSet.getAttributes()) { int attributeIndex = (int)example.getValue(attribute); counters[attributeCounter][attributeIndex][labelIndex] += weight; counters[attributeCounter][0][labelIndex] -= weight; attributeCounter++; } } // calculate the actual chi-squared values and assign them to weights AttributeWeights weights = new AttributeWeights(exampleSet); int attributeCounter = 0; for (Attribute attribute : exampleSet.getAttributes()) { double weight = ContingencyTableTools.getChiSquaredStatistics(ContingencyTableTools.deleteEmpty(counters[attributeCounter]), false); weights.setWeight(attribute.getName(), weight); attributeCounter++; } return weights; } public List<ParameterType> getParameterTypes() { List<ParameterType> types = super.getParameterTypes(); types.add(new ParameterTypeInt(BinDiscretization.PARAMETER_NUMBER_OF_BINS, "The number of bins used for discretization of numerical attributes before the chi squared test can be performed.", 2, Integer.MAX_VALUE, 10)); return types; } }