/* * Copyright (c) 2012. The Genome Analysis Centre, Norwich, UK * MISO project contacts: Robert Davey, Mario Caccamo @ TGAC * ********************************************************************* * * This file is part of MISO. * * MISO is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * MISO is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with MISO. If not, see <http://www.gnu.org/licenses/>. * * ********************************************************************* */ package uk.ac.bbsrc.tgac.miso.core.service.integration.ws.solid; import java.util.ArrayList; import java.util.List; import javax.xml.bind.annotation.XmlAccessType; import javax.xml.bind.annotation.XmlAccessorType; import javax.xml.bind.annotation.XmlElement; import javax.xml.bind.annotation.XmlType; /** * <p>Java class for run complex type. * * <p>The following schema fragment specifies the expected content contained within this class. * * <pre> * <complexType name="run"> * <complexContent> * <restriction base="{http://www.w3.org/2001/XMLSchema}anyType"> * <sequence> * <element name="creator" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="dateCompleted" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="dateCreated" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="dateStarted" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="flowcellNum" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="id" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="instrumentName" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="name" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * <element name="numberOfSamples" type="{http://www.w3.org/2001/XMLSchema}int" minOccurs="0"/> * <element name="qualityMetrics" type="{http://solid.aga.appliedbiosystems.com}qualityMetrics" maxOccurs="unbounded" minOccurs="0"/> * <element name="sampleInfoList" type="{http://solid.aga.appliedbiosystems.com}sampleInfo" maxOccurs="unbounded" minOccurs="0"/> * <element name="xml" type="{http://www.w3.org/2001/XMLSchema}string" minOccurs="0"/> * </sequence> * </restriction> * </complexContent> * </complexType> * </pre> * * */ @XmlAccessorType(XmlAccessType.FIELD) @XmlType(name = "run", propOrder = { "creator", "dateCompleted", "dateCreated", "dateStarted", "flowcellNum", "id", "instrumentName", "name", "numberOfSamples", "qualityMetrics", "sampleInfoList", "xml" }) public class Run { protected String creator; protected String dateCompleted; protected String dateCreated; protected String dateStarted; protected String flowcellNum; protected String id; protected String instrumentName; protected String name; protected Integer numberOfSamples; @XmlElement(nillable = true) protected List<QualityMetrics> qualityMetrics; @XmlElement(nillable = true) protected List<SampleInfo> sampleInfoList; protected String xml; /** * Gets the value of the creator property. * * @return * possible object is * {@link String } * */ public String getCreator() { return creator; } /** * Sets the value of the creator property. * * @param value * allowed object is * {@link String } * */ public void setCreator(String value) { this.creator = value; } /** * Gets the value of the dateCompleted property. * * @return * possible object is * {@link String } * */ public String getDateCompleted() { return dateCompleted; } /** * Sets the value of the dateCompleted property. * * @param value * allowed object is * {@link String } * */ public void setDateCompleted(String value) { this.dateCompleted = value; } /** * Gets the value of the dateCreated property. * * @return * possible object is * {@link String } * */ public String getDateCreated() { return dateCreated; } /** * Sets the value of the dateCreated property. * * @param value * allowed object is * {@link String } * */ public void setDateCreated(String value) { this.dateCreated = value; } /** * Gets the value of the dateStarted property. * * @return * possible object is * {@link String } * */ public String getDateStarted() { return dateStarted; } /** * Sets the value of the dateStarted property. * * @param value * allowed object is * {@link String } * */ public void setDateStarted(String value) { this.dateStarted = value; } /** * Gets the value of the flowcellNum property. * * @return * possible object is * {@link String } * */ public String getFlowcellNum() { return flowcellNum; } /** * Sets the value of the flowcellNum property. * * @param value * allowed object is * {@link String } * */ public void setFlowcellNum(String value) { this.flowcellNum = value; } /** * Gets the value of the id property. * * @return * possible object is * {@link String } * */ public String getId() { return id; } /** * Sets the value of the id property. * * @param value * allowed object is * {@link String } * */ public void setId(String value) { this.id = value; } /** * Gets the value of the instrumentName property. * * @return * possible object is * {@link String } * */ public String getInstrumentName() { return instrumentName; } /** * Sets the value of the instrumentName property. * * @param value * allowed object is * {@link String } * */ public void setInstrumentName(String value) { this.instrumentName = value; } /** * Gets the value of the name property. * * @return * possible object is * {@link String } * */ public String getName() { return name; } /** * Sets the value of the name property. * * @param value * allowed object is * {@link String } * */ public void setName(String value) { this.name = value; } /** * Gets the value of the numberOfSamples property. * * @return * possible object is * {@link Integer } * */ public Integer getNumberOfSamples() { return numberOfSamples; } /** * Sets the value of the numberOfSamples property. * * @param value * allowed object is * {@link Integer } * */ public void setNumberOfSamples(Integer value) { this.numberOfSamples = value; } /** * Gets the value of the qualityMetrics property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the qualityMetrics property. * * <p> * For example, to add a new item, do as follows: * <pre> * getQualityMetrics().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link QualityMetrics } * * */ public List<QualityMetrics> getQualityMetrics() { if (qualityMetrics == null) { qualityMetrics = new ArrayList<QualityMetrics>(); } return this.qualityMetrics; } /** * Gets the value of the sampleInfoList property. * * <p> * This accessor method returns a reference to the live list, * not a snapshot. Therefore any modification you make to the * returned list will be present inside the JAXB object. * This is why there is not a <CODE>set</CODE> method for the sampleInfoList property. * * <p> * For example, to add a new item, do as follows: * <pre> * getSampleInfoList().add(newItem); * </pre> * * * <p> * Objects of the following type(s) are allowed in the list * {@link SampleInfo } * * */ public List<SampleInfo> getSampleInfoList() { if (sampleInfoList == null) { sampleInfoList = new ArrayList<SampleInfo>(); } return this.sampleInfoList; } /** * Gets the value of the xml property. * * @return * possible object is * {@link String } * */ public String getXml() { return xml; } /** * Sets the value of the xml property. * * @param value * allowed object is * {@link String } * */ public void setXml(String value) { this.xml = value; } }