/**
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.mahout.math.stats.entropy;
import com.google.common.io.Closeables;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.DoubleWritable;
import org.apache.hadoop.io.SequenceFile;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.Writable;
import org.apache.hadoop.util.ToolRunner;
import org.apache.mahout.common.MahoutTestCase;
import org.apache.mahout.common.iterator.sequencefile.PathFilters;
import org.apache.mahout.common.iterator.sequencefile.PathType;
import org.apache.mahout.common.iterator.sequencefile.SequenceFileDirValueIterator;
import org.junit.Test;
import java.util.Iterator;
public final class EntropyTest extends MahoutTestCase {
@Test
public void testLetters() throws Exception {
String[] content = { "A", "A", "A", "A", "A", "B", "B", "C", "D", "E" };
calculateEntropy(content, 1.96096405, "key");
}
@Test
public void testYN() throws Exception {
String[] content = { "Yes", "No", "Yes", "No", "No", "Yes", "No", "Yes" };
calculateEntropy(content, 1.0, "value");
}
private void calculateEntropy(String[] content, double expected, String source) throws Exception {
Configuration configuration = new Configuration();
FileSystem fileSystem = FileSystem.get(configuration);
Path input = getTestTempFilePath("input");
Path output = getTestTempFilePath("output");
// write content into test text file
SequenceFile.Writer writer = new SequenceFile.Writer(fileSystem, configuration, input, Text.class, Text.class);
Writable empty = new Text();
try {
for (String item : content) {
if ("key".equals(source)) {
writer.append(new Text(item), empty);
} else {
writer.append(empty, new Text(item));
}
}
} finally {
Closeables.closeQuietly(writer);
}
// run the job
String[] args = { "-i", input.toString(), "-o", output.toString(), "-s", source };
Entropy job = new Entropy();
ToolRunner.run(job, args);
assertEquals(content.length, job.getNumberItems());
// check output
Iterator<DoubleWritable> iteratorNodes =
new SequenceFileDirValueIterator<DoubleWritable>(output,
PathType.LIST,
PathFilters.logsCRCFilter(),
null,
false,
new Configuration());
assertTrue(iteratorNodes.hasNext());
assertEquals(expected, iteratorNodes.next().get(), EPSILON);
}
}