/** * Licensed to the Apache Software Foundation (ASF) under one or more * contributor license agreements. See the NOTICE file distributed with * this work for additional information regarding copyright ownership. * The ASF licenses this file to You under the Apache License, Version 2.0 * (the "License"); you may not use this file except in compliance with * the License. You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. */ package org.apache.mahout.classifier.bayes.mapreduce.bayes; import java.io.IOException; import java.util.Map; import com.google.common.collect.Maps; import org.apache.hadoop.io.DefaultStringifier; import org.apache.hadoop.io.DoubleWritable; import org.apache.hadoop.mapred.JobConf; import org.apache.hadoop.mapred.MapReduceBase; import org.apache.hadoop.mapred.Mapper; import org.apache.hadoop.mapred.OutputCollector; import org.apache.hadoop.mapred.Reporter; import org.apache.hadoop.util.GenericsUtil; import org.apache.mahout.classifier.bayes.mapreduce.common.BayesConstants; import org.apache.mahout.common.Parameters; import org.apache.mahout.common.StringTuple; import org.apache.mahout.math.map.OpenObjectDoubleHashMap; import org.slf4j.Logger; import org.slf4j.LoggerFactory; /** * Mapper for Calculating the ThetaNormalizer for a label in Naive Bayes Algorithm * */ public class BayesThetaNormalizerMapper extends MapReduceBase implements Mapper<StringTuple,DoubleWritable,StringTuple,DoubleWritable> { private static final Logger log = LoggerFactory.getLogger(BayesThetaNormalizerMapper.class); private final OpenObjectDoubleHashMap<String> labelWeightSum = new OpenObjectDoubleHashMap<String>(); private double sigmaJSigmaK; private double vocabCount; private double alphaI = 1.0; /** * We need to calculate the thetaNormalization factor of each label * * @param key * The label,feature pair * @param value * The tfIdf of the pair */ @Override public void map(StringTuple key, DoubleWritable value, OutputCollector<StringTuple,DoubleWritable> output, Reporter reporter) throws IOException { String label = key.stringAt(1); reporter.setStatus("Bayes Theta Normalizer Mapper: " + label); double weight = Math.log((value.get() + alphaI) / (labelWeightSum.get(label) + vocabCount)); StringTuple thetaNormalizerTuple = new StringTuple(BayesConstants.LABEL_THETA_NORMALIZER); thetaNormalizerTuple.add(label); output.collect(thetaNormalizerTuple, new DoubleWritable(weight)); } @Override public void configure(JobConf job) { try { labelWeightSum.clear(); Map<String,Double> labelWeightSumTemp = Maps.newHashMap(); DefaultStringifier<Map<String,Double>> mapStringifier = new DefaultStringifier<Map<String,Double>>(job, GenericsUtil.getClass(labelWeightSumTemp)); String labelWeightSumString = job.get("cnaivebayes.sigma_k", mapStringifier.toString(labelWeightSumTemp)); labelWeightSumTemp = mapStringifier.fromString(labelWeightSumString); for (Map.Entry<String, Double> stringDoubleEntry : labelWeightSumTemp.entrySet()) { this.labelWeightSum.put(stringDoubleEntry.getKey(), stringDoubleEntry.getValue()); } DefaultStringifier<Double> stringifier = new DefaultStringifier<Double>(job, GenericsUtil .getClass(sigmaJSigmaK)); String sigmaJSigmaKString = job.get("cnaivebayes.sigma_jSigma_k", stringifier.toString(sigmaJSigmaK)); sigmaJSigmaK = stringifier.fromString(sigmaJSigmaKString); String vocabCountString = stringifier.toString(vocabCount); vocabCountString = job.get("cnaivebayes.vocabCount", vocabCountString); vocabCount = stringifier.fromString(vocabCountString); Parameters params = new Parameters(job.get("bayes.parameters", "")); alphaI = Double.valueOf(params.get("alpha_i", "1.0")); } catch (IOException ex) { log.warn(ex.toString(), ex); } } }