/** * Licensed to the Apache Software Foundation (ASF) under one or more * contributor license agreements. See the NOTICE file distributed with * this work for additional information regarding copyright ownership. * The ASF licenses this file to You under the Apache License, Version 2.0 * (the "License"); you may not use this file except in compliance with * the License. You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. */ package org.apache.mahout.clustering.meanshift; import java.io.IOException; import java.util.List; import com.google.common.collect.Lists; import org.apache.hadoop.conf.Configuration; import org.apache.hadoop.fs.Path; import org.apache.hadoop.io.IntWritable; import org.apache.hadoop.io.WritableComparable; import org.apache.hadoop.mapreduce.Mapper; import org.apache.mahout.clustering.WeightedVectorWritable; import org.apache.mahout.common.iterator.sequencefile.PathFilters; import org.apache.mahout.common.iterator.sequencefile.PathType; import org.apache.mahout.common.iterator.sequencefile.SequenceFileDirValueIterable; public class MeanShiftCanopyClusterMapper extends Mapper<WritableComparable<?>, MeanShiftCanopy, IntWritable, WeightedVectorWritable> { private List<MeanShiftCanopy> canopies; @Override protected void map(WritableComparable<?> key, MeanShiftCanopy canopy, Context context) throws IOException, InterruptedException { // canopies use canopyIds assigned when input vectors are processed as vectorIds too int vectorId = canopy.getId(); for (MeanShiftCanopy msc : canopies) { for (int containedId : msc.getBoundPoints().toList()) { if (vectorId == containedId) { context.write(new IntWritable(msc.getId()), new WeightedVectorWritable(1, canopy.getCenter())); } } } } @Override protected void setup(Context context) throws IOException, InterruptedException { super.setup(context); canopies = getCanopies(context.getConfiguration()); } public static List<MeanShiftCanopy> getCanopies(Configuration conf) { String statePath = conf.get(MeanShiftCanopyDriver.STATE_IN_KEY); List<MeanShiftCanopy> canopies = Lists.newArrayList(); Path path = new Path(statePath); for (MeanShiftCanopy value : new SequenceFileDirValueIterable<MeanShiftCanopy>(path, PathType.LIST, PathFilters.logsCRCFilter(), conf)) { canopies.add(value); } return canopies; } }