/**
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.mahout.clustering.fuzzykmeans;
import java.io.IOException;
import java.util.Collection;
import java.util.List;
import com.google.common.collect.Lists;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.io.WritableComparable;
import org.apache.hadoop.mapreduce.Mapper;
import org.apache.mahout.clustering.ClusterObservations;
import org.apache.mahout.math.VectorWritable;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
public class FuzzyKMeansMapper extends Mapper<WritableComparable<?>,VectorWritable,Text,ClusterObservations> {
private static final Logger log = LoggerFactory.getLogger(FuzzyKMeansMapper.class);
private final List<SoftCluster> clusters = Lists.newArrayList();
private FuzzyKMeansClusterer clusterer;
@Override
protected void map(WritableComparable<?> key, VectorWritable point, Context context)
throws IOException, InterruptedException {
clusterer.emitPointProbToCluster(point.get(), clusters, context);
}
@Override
protected void setup(Context context) throws IOException, InterruptedException {
super.setup(context);
Configuration job = context.getConfiguration();
clusterer = new FuzzyKMeansClusterer(job);
log.info("In Mapper Configure:");
String clusterPath = job.get(FuzzyKMeansConfigKeys.CLUSTER_PATH_KEY);
if (clusterPath != null && !clusterPath.isEmpty()) {
FuzzyKMeansUtil.configureWithClusterInfo(new Path(clusterPath), clusters);
}
if (clusters.isEmpty()) {
throw new IllegalStateException("No clusters found. Check your -c path.");
}
}
/**
* Configure the mapper by providing its clusters. Used by unit tests.
*
* @param clusters
* a List<Cluster>
*/
void config(Collection<SoftCluster> clusters) {
this.clusters.clear();
this.clusters.addAll(clusters);
}
}