EcdbBaseType.java

/*
*   EuroCarbDB, a framework for carbohydrate bioinformatics
*
*   Copyright (c) 2006-2009, Eurocarb project, or third-party contributors as
*   indicated by the @author tags or express copyright attribution
*   statements applied by the authors.  
*
*   This copyrighted material is made available to anyone wishing to use, modify,
*   copy, or redistribute it subject to the terms and conditions of the GNU
*   Lesser General Public License, as published by the Free Software Foundation.
*   A copy of this license accompanies this distribution in the file LICENSE.txt.
*
*   This program is distributed in the hope that it will be useful,
*   but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
*   or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License
*   for more details.
*
*   Last commit: $Rev: 1210 $ by $Author: glycoslave $ on $Date:: 2009-06-12 #$  
*/
/**
* 
*/
package org.eurocarbdb.resourcesdb.glycoconjugate_derived;


/**
* @author rene
*
*/
public enum EcdbBaseType
{
    DGRO("dgro","2"),
    LGRO("lgro","1"),
    DERY("dery","22"),
    LERY("lery","11"),      
    DRIB("drib","222"),
    LRIB("lrib","111"),     
    DARA("dara","122"),
    LARA("lara","211"),
    DALL("dall","2222"),
    LALL("lall","1111"),
    DALT("dalt","1222"),
    LALT("lalt","2111"),
    DGLC("dglc","2122"),
    LGLC("lglc","1211"),
    DMAN("dman","1122"),
    LMAN("lman","2211"),
    DTHR("dthr","12"),
    LTHR("lthr","21"),
    DXYL("dxyl","212"),
    LXYL("lxyl","121"),
    DLYX("dlyx","112"),
    LLYX("llyx","221"),
    DGUL("dgul","2212"),
    LDUL("lgul","1121"),
    DIDO("dido","1212"),
    LIDO("lido","2121"),
    DGAL("dgal","2112"),
    LGAL("lgal","1221"),
    DTAL("dtal","1112"),
    LTAL("ltal","2221"),

    // basetype jokers
    XGRO("xgro","*"),
    XTHR("xthr","**"),
    XERY("xery","**"),
    XARA("xara","***"),
    XRIB("xrib","***"),
    XLYX("xlyx","***"),
    XXYL("xxyl","***"),     
    XALL("xall","****"),
    XALT("xalt","****"),
    XMAN("xman","****"),
    XGLC("xglc","****"),
    XGUL("xgul","****"),
    XIDO("xido","****"),
    XTAL("xtal","****"),
    XGAL("xgal","****");
    
    private String m_strName;
    private String m_strStereo;
    
    private EcdbBaseType( String a_strName, String a_strStereo )
    {
        this.m_strName = a_strName;
        this.m_strStereo = a_strStereo;
    }
    
    public String getName() 
    {  
        return this.m_strName;  
    }
    
    public String getStereo() 
    {  
        return this.m_strStereo;  
    }
    
    public static EcdbBaseType forName( String a_strName ) throws GlycoconjugateException
    {
        String t_strName = a_strName.toUpperCase();
        for ( EcdbBaseType t_objBasetype : EcdbBaseType.values() )
        {
            if ( t_objBasetype.m_strName.equalsIgnoreCase(t_strName) )
            {
                return t_objBasetype;
            }
        }
        throw new GlycoconjugateException("Invalid value for basetype");
    }    
}