/*
* EuroCarbDB, a framework for carbohydrate bioinformatics
*
* Copyright (c) 2006-2009, Eurocarb project, or third-party contributors as
* indicated by the @author tags or express copyright attribution
* statements applied by the authors.
*
* This copyrighted material is made available to anyone wishing to use, modify,
* copy, or redistribute it subject to the terms and conditions of the GNU
* Lesser General Public License, as published by the Free Software Foundation.
* A copy of this license accompanies this distribution in the file LICENSE.txt.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
* or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License
* for more details.
*
* Last commit: $Rev: 1930 $ by $Author: david@nixbioinf.org $ on $Date:: 2010-07-29 #$
*/
package org.eurocarbdb.application.glycanbuilder;
/**
This class contains the graphic options used to determine the
display of the glycan structures. Objects of this class are used by
the renderers to determine the aspect of residues and linkages. To
change the aspect of glycan structures the {@link #NOTATION} and
{@link #DISPLAY} variables are used. To change the value of the
graphic options and specify a custom aspect the {@link #DISPLAY}
variale should be set to {@link #DISPLAY_CUSTOM} and the user should
set the variables ending with _CUSTOM.
@author Alessio Ceroni (a.ceroni@imperial.ac.uk)
*/
public class GraphicOptions {
// visualization options
/** Cartoon notation used to display the structures, influences
the graphic style of residues and linkages */
public String NOTATION = NOTATION_CFG;
/** CFG notation (default) */
public static final String NOTATION_CFG = "cfg";
/** Black and white CFG notation */
public static final String NOTATION_CFGBW = "cfgbw";
/** CFG notation with residue position depending on linkages */
public static final String NOTATION_CFGLINK = "cfglink";
/** UOXF notation */
public static final String NOTATION_UOXF = "uoxf";
/** 2D text only notation */
public static final String NOTATION_TEXT = "text";
/** UOXF colour */
public static final String NOTATION_UOXFCOL = "uoxfcol";
public String THEME = "org.pushingpixels.substance.api.skin.TwilightSkin";
/** Specify one of the possible preset variations on the basic
cartoon notation. To set the value of this variable the
setDisplay() method must be used */
public String DISPLAY = DISPLAY_NORMALINFO;
/** Use the custom settings defined by the user */
public static final String DISPLAY_CUSTOM = "custom";
/** Reduce the space between residues and do not display the linkage information */
public static final String DISPLAY_COMPACT = "compact";
/** Do not display the linkage information */
public static final String DISPLAY_NORMAL = "normal";
/** Default representation */
public static final String DISPLAY_NORMALINFO = "normalinfo";
/** Specify the orientation of the structure */
public int ORIENTATION = RL;
/** Right-to-left orientation (default) */
public static final int RL = 0;
/** Bottom-to-top orientation */
public static final int BT = 1;
/** Left-to-right orientation */
public static final int LR = 2;
/** Top-to-bottom orientation */
public static final int TB = 3;
// canvas options
/** Specify the scaling factor to be applied to the drawing canvas
* only (default = 1) */
public double SCALE_CANVAS = 1.;
/** Specify if antennae with unspecified connectivity and the same
structure should be grouped together (default = true)*/
public boolean COLLAPSE_MULTIPLE_ANTENNAE = true;
/** Specify if the mass information should be displayed in the
drawing canvas (default = true)*/
public boolean SHOW_MASSES_CANVAS = true;
/** Specify if the reducing-end marker should be displayed in the
drawing canvas (default = true)*/
public boolean SHOW_REDEND_CANVAS = true;
// exporting options
/** Specify if the mass information should be displayed when
exporting (default = false)*/
public boolean SHOW_MASSES = false;
/** Specify if the reducing-end marker should be displayed when
exporting (default = false)*/
public boolean SHOW_REDEND = false;
// size options
/** Specify if the linkage information should be displayed (default = true) */
public boolean SHOW_INFO = true;
/** Margin to the left of the drawing */
public int MARGIN_LEFT = MARGIN_LEFT_DEFAULT;
/** Margin at the top of the drawing */
public int MARGIN_TOP = MARGIN_TOP_DEFAULT;
/** Margin to the right of the drawing */
public int MARGIN_RIGHT = MARGIN_RIGHT_DEFAULT;
/** Margin at the bottom of the drawing */
public int MARGIN_BOTTOM = MARGIN_BOTTOM_DEFAULT;
/** Size of the bounding box of a residue. */
public int NODE_SIZE = NODE_SIZE_DEFAULT;
/** Size of the font used to display text on a residue */
public int NODE_FONT_SIZE = NODE_FONT_SIZE_DEFAULT;
/** Type of the font used to display text on a residue */
public String NODE_FONT_FACE = NODE_FONT_FACE_DEFAULT;
/** Size of the font used to display a glycan composition */
public int COMPOSITION_FONT_SIZE = COMPOSITION_FONT_SIZE_DEFAULT;
/** Type of the font used to display a glycan composition */
public String COMPOSITION_FONT_FACE = COMPOSITION_FONT_FACE_DEFAULT;
/** Size of the font used to display the linkage information */
public int LINKAGE_INFO_SIZE = LINKAGE_INFO_SIZE_DEFAULT;
/** Type of the font used to display the linkage information */
public String LINKAGE_INFO_FONT_FACE = LINKAGE_INFO_FONT_FACE_DEFAULT;
/** Space between the residues */
public int NODE_SPACE = NODE_SPACE_DEFAULT;
/** Space between the residue and the border residues */
public int NODE_SUB_SPACE = NODE_SUB_SPACE_DEFAULT;
/** Space between the structures */
public int STRUCTURES_SPACE = STRUCTURES_SPACE_DEFAULT;
/** Space between the structure and the mass information */
public int MASS_TEXT_SPACE = MASS_TEXT_SPACE_DEFAULT;
/** Size of the font used to display the mass information */
public int MASS_TEXT_SIZE = MASS_TEXT_SIZE_DEFAULT;
/** Type of the font used to display the mass information */
public String MASS_TEXT_FONT_FACE = MASS_TEXT_FONT_FACE_DEFAULT;
/** Scaling factor applied to the structure. To set the value of
this variable the setScale() method must be used */
public double SCALE = 1.;
// size customs
/** User-defined value for the {@link #MARGIN_LEFT} variable */
public int MARGIN_LEFT_CUSTOM = MARGIN_LEFT_DEFAULT;
/** User-defined value for the {@link #MARGIN_TOP} variable */
public int MARGIN_TOP_CUSTOM = MARGIN_TOP_DEFAULT;
/** User-defined value for the {@link #MARGIN_RIGHT} variable */
public int MARGIN_RIGHT_CUSTOM = MARGIN_RIGHT_DEFAULT;
/** User-defined value for the {@link #MARGIN_BOTTOM} variable */
public int MARGIN_BOTTOM_CUSTOM = MARGIN_BOTTOM_DEFAULT;
/** User-defined value for the {@link #SHOW_INFO} variable */
public boolean SHOW_INFO_CUSTOM = true;
/** User-defined value for the {@link #NODE_SIZE} variable */
public int NODE_SIZE_CUSTOM = NODE_SIZE_DEFAULT;
/** User-defined value for the {@link #NODE_FONT_SIZE} variable */
public int NODE_FONT_SIZE_CUSTOM = NODE_FONT_SIZE_DEFAULT;
/** User-defined value for the {@link #NODE_FONT_FACE} variable */
public String NODE_FONT_FACE_CUSTOM = NODE_FONT_FACE_DEFAULT;
/** User-defined value for the {@link #COMPOSITION_FONT_SIZE} variable */
public int COMPOSITION_FONT_SIZE_CUSTOM = COMPOSITION_FONT_SIZE_DEFAULT;
/** User-defined value for the {@link #COMPOSITION_FONT_FACE} variable */
public String COMPOSITION_FONT_FACE_CUSTOM = COMPOSITION_FONT_FACE_DEFAULT;
/** User-defined value for the {@link #LINKAGE_INFO_SIZE} variable */
public int LINKAGE_INFO_SIZE_CUSTOM = LINKAGE_INFO_SIZE_DEFAULT;
/** User-defined value for the {@link #LINKAGE_INFO_FONT_FACE} variable */
public String LINKAGE_INFO_FONT_FACE_CUSTOM = LINKAGE_INFO_FONT_FACE_DEFAULT;
/** User-defined value for the {@link #NODE_SPACE} variable */
public int NODE_SPACE_CUSTOM = NODE_SPACE_DEFAULT;
/** User-defined value for the {@link #NODE_SUB_SPACE} variable */
public int NODE_SUB_SPACE_CUSTOM = NODE_SUB_SPACE_DEFAULT;
/** User-defined value for the {@link #STRUCTURES_SPACE} variable */
public int STRUCTURES_SPACE_CUSTOM = STRUCTURES_SPACE_DEFAULT;
/** User-defined value for the {@link #MASS_TEXT_SPACE} variable */
public int MASS_TEXT_SPACE_CUSTOM = MASS_TEXT_SPACE_DEFAULT;
/** User-defined value for the {@link #MASS_TEXT_SIZE} variable */
public int MASS_TEXT_SIZE_CUSTOM = MASS_TEXT_SIZE_DEFAULT;
/** User-defined value for the {@link #MASS_TEXT_FONT_FACE} variable */
public String MASS_TEXT_FONT_FACE_CUSTOM = MASS_TEXT_FONT_FACE_DEFAULT;
// size constants
private static final int MARGIN_LEFT_DEFAULT = 30;
private static final int MARGIN_TOP_DEFAULT = 30;
private static final int MARGIN_RIGHT_DEFAULT = 30;
private static final int MARGIN_BOTTOM_DEFAULT = 30;
private static final int NODE_SIZE_DEFAULT = 22;
private static final int NODE_FONT_SIZE_DEFAULT = 14;
private static final String NODE_FONT_FACE_DEFAULT = "SansSerif.plain";
private static final int COMPOSITION_FONT_SIZE_DEFAULT = 18;
private static final String COMPOSITION_FONT_FACE_DEFAULT = "SansSerif.plain";
private static final int LINKAGE_INFO_SIZE_DEFAULT = 12;
private static final String LINKAGE_INFO_FONT_FACE_DEFAULT = "Serif.plain";
private static final int NODE_SPACE_DEFAULT = 30;
private static final int NODE_SUB_SPACE_DEFAULT = 1;
private static final int MASS_TEXT_SPACE_DEFAULT = 15;
private static final int MASS_TEXT_SIZE_DEFAULT = 14;
private static final String MASS_TEXT_FONT_FACE_DEFAULT = "SansSerif.plain";
private static final int STRUCTURES_SPACE_DEFAULT = 40;
public static final int ICON_SIZE_MEDIUM = 26;
public static final int ICON_SIZE_SMALL = 26;
// methods
/**
Default constructor.
*/
public GraphicOptions() {
}
/**
Copy constructor.
*/
public GraphicOptions(GraphicOptions other) {
if( other!=null )
this.copy(other);
}
/**
Default constructor with display option specified
*/
public GraphicOptions(String display) {
SCALE = 1.;
setDisplay(display);
}
/**
Convenience method that return all the font types available in
the system.
*/
static public java.util.Vector<String> getAllFontFaces() {
java.awt.GraphicsEnvironment ge = java.awt.GraphicsEnvironment.getLocalGraphicsEnvironment();
java.util.Vector<String> ret = new java.util.Vector<String>();
java.awt.Font[] all_fonts = ge.getAllFonts();
for( int i=0; i<all_fonts.length; i++ )
ret.add(all_fonts[i].getFontName());
return ret;
}
/**
Init the user-defined graphic options to the values
corresponding to a specific preset.
*/
public void initCustomDisplay(String display) {
MARGIN_LEFT_CUSTOM = MARGIN_LEFT_DEFAULT;
MARGIN_TOP_CUSTOM = MARGIN_TOP_DEFAULT;
MARGIN_RIGHT_CUSTOM = MARGIN_RIGHT_DEFAULT;
MARGIN_BOTTOM_CUSTOM = MARGIN_BOTTOM_DEFAULT;
NODE_SIZE_CUSTOM = NODE_SIZE_DEFAULT;
NODE_FONT_SIZE_CUSTOM = NODE_FONT_SIZE_DEFAULT;
NODE_FONT_FACE_CUSTOM = NODE_FONT_FACE_DEFAULT;
COMPOSITION_FONT_SIZE_CUSTOM = COMPOSITION_FONT_SIZE_DEFAULT;
COMPOSITION_FONT_FACE_CUSTOM = COMPOSITION_FONT_FACE_DEFAULT;
LINKAGE_INFO_SIZE_CUSTOM = LINKAGE_INFO_SIZE_DEFAULT;
LINKAGE_INFO_FONT_FACE_CUSTOM = LINKAGE_INFO_FONT_FACE_DEFAULT;
NODE_SUB_SPACE_CUSTOM = NODE_SUB_SPACE_DEFAULT;
STRUCTURES_SPACE_CUSTOM = STRUCTURES_SPACE_DEFAULT;
MASS_TEXT_SPACE_CUSTOM = MASS_TEXT_SPACE_DEFAULT;
MASS_TEXT_SIZE_CUSTOM = MASS_TEXT_SIZE_DEFAULT;
MASS_TEXT_FONT_FACE_CUSTOM = MASS_TEXT_FONT_FACE_DEFAULT;
if( display.equals(DISPLAY_COMPACT) ) {
NODE_SPACE_CUSTOM = (int)(NODE_SPACE_DEFAULT*SCALE/2.);
SHOW_INFO_CUSTOM = false;
}
else if( display.equals(DISPLAY_NORMAL) ) {
NODE_SPACE_CUSTOM = (int)(NODE_SPACE_DEFAULT*SCALE);
SHOW_INFO_CUSTOM = false;
}
else {
NODE_SPACE_CUSTOM = (int)(NODE_SPACE_DEFAULT*SCALE);
SHOW_INFO_CUSTOM = (SCALE>=1.);
}
}
/**
Set the display variable and init all the graphic options
accordingly.
*/
public void setDisplay(String display) {
if( !display.equals(DISPLAY_CUSTOM) ) {
// default settings
MARGIN_LEFT = (int)(MARGIN_LEFT_DEFAULT*SCALE);
MARGIN_TOP = (int)(MARGIN_TOP_DEFAULT*SCALE);
MARGIN_RIGHT = (int)( MARGIN_RIGHT_DEFAULT*SCALE);
MARGIN_BOTTOM = (int)(MARGIN_BOTTOM_DEFAULT*SCALE);
NODE_SIZE = (int)(NODE_SIZE_DEFAULT*SCALE);
NODE_FONT_SIZE = Math.max(10,(int)(NODE_FONT_SIZE_DEFAULT*SCALE));
NODE_FONT_FACE = NODE_FONT_FACE_DEFAULT;
COMPOSITION_FONT_SIZE = Math.max(14,(int)(COMPOSITION_FONT_SIZE_DEFAULT*SCALE));
COMPOSITION_FONT_FACE = COMPOSITION_FONT_FACE_DEFAULT;
LINKAGE_INFO_SIZE = Math.max(8,(int)(LINKAGE_INFO_SIZE_DEFAULT*SCALE));
LINKAGE_INFO_FONT_FACE = LINKAGE_INFO_FONT_FACE_DEFAULT;
NODE_SUB_SPACE = (int)(NODE_SUB_SPACE_DEFAULT*SCALE);
STRUCTURES_SPACE = (int)(STRUCTURES_SPACE_DEFAULT*SCALE);
MASS_TEXT_SPACE = (int)(MASS_TEXT_SPACE_DEFAULT*SCALE);
MASS_TEXT_SIZE = Math.max(10,(int)(MASS_TEXT_SIZE_DEFAULT*SCALE));
MASS_TEXT_FONT_FACE = MASS_TEXT_FONT_FACE_DEFAULT;
if( display.equals(DISPLAY_COMPACT) ) {
NODE_SPACE = (int)(NODE_SPACE_DEFAULT*SCALE/2.);
SHOW_INFO = false;
DISPLAY = DISPLAY_COMPACT;
}
else if( display.equals(DISPLAY_NORMAL) ) {
NODE_SPACE = (int)(NODE_SPACE_DEFAULT*SCALE);
SHOW_INFO = false;
DISPLAY = DISPLAY_NORMAL;
}
else {
NODE_SPACE = (int)(NODE_SPACE_DEFAULT*SCALE);
SHOW_INFO = (SCALE>=1.);
DISPLAY = DISPLAY_NORMALINFO;
}
}
else {
// custom settings
MARGIN_LEFT = (int)(MARGIN_LEFT_CUSTOM*SCALE);
MARGIN_TOP = (int)(MARGIN_TOP_CUSTOM*SCALE);
MARGIN_RIGHT = (int)( MARGIN_RIGHT_CUSTOM*SCALE);
MARGIN_BOTTOM = (int)(MARGIN_BOTTOM_CUSTOM*SCALE);
SHOW_INFO = SHOW_INFO_CUSTOM && (SCALE>=1.);
NODE_SIZE = (int)(NODE_SIZE_CUSTOM*SCALE);
NODE_FONT_SIZE = Math.max(10,(int)(NODE_FONT_SIZE_CUSTOM*SCALE));
NODE_FONT_FACE = NODE_FONT_FACE_CUSTOM;
COMPOSITION_FONT_SIZE = Math.max(14,(int)(COMPOSITION_FONT_SIZE_CUSTOM*SCALE));
COMPOSITION_FONT_FACE = COMPOSITION_FONT_FACE_CUSTOM;
LINKAGE_INFO_SIZE =Math.max(8,(int)(LINKAGE_INFO_SIZE_CUSTOM*SCALE));
LINKAGE_INFO_FONT_FACE = LINKAGE_INFO_FONT_FACE_CUSTOM;
NODE_SPACE = (int)(NODE_SPACE_CUSTOM*SCALE);
NODE_SUB_SPACE = (int)(NODE_SUB_SPACE_CUSTOM*SCALE);
STRUCTURES_SPACE = (int)(STRUCTURES_SPACE_CUSTOM*SCALE);
MASS_TEXT_SPACE = (int)(MASS_TEXT_SPACE_CUSTOM*SCALE);
MASS_TEXT_SIZE = Math.max(10,(int)(MASS_TEXT_SIZE_CUSTOM*SCALE));
MASS_TEXT_FONT_FACE = MASS_TEXT_FONT_FACE_CUSTOM;
DISPLAY = DISPLAY_CUSTOM;
}
}
/**
Return the orientation as a {@link ResAngle} object
*/
public ResAngle getOrientationAngle() {
return getOrientationAngle(ORIENTATION);
}
/**
Return an orientation as a {@link ResAngle} object
*/
public static ResAngle getOrientationAngle(int orientation) {
if( orientation == LR )
return new ResAngle(0);
if( orientation == RL )
return new ResAngle(180);
if( orientation == BT )
return new ResAngle(-90);
if( orientation == TB )
return new ResAngle(90);
return new ResAngle(0);
}
/**
Set the scaling factor to a specific value.
*/
public double setScale(double scale) {
// compute nearest feasible scale
// solve problem of drawing triangles and diamonds
if( !DISPLAY.equals(DISPLAY_CUSTOM) ) {
if( (((int)(NODE_SIZE_DEFAULT*scale))%2)==1 )
SCALE = (double)((int)(NODE_SIZE_DEFAULT*scale)+1)/(double)NODE_SIZE_DEFAULT;
else
SCALE = scale;
}
else {
if( (((int)(NODE_SIZE_CUSTOM*scale))%2)==1 )
SCALE = (double)((int)(NODE_SIZE_CUSTOM*scale)+1)/(double)NODE_SIZE_CUSTOM;
else
SCALE = scale;
}
// set options
setDisplay(DISPLAY);
// return effective scale
return SCALE;
}
/**
Store the options in the configuration
*/
public void store(Configuration config) {
config.put("GraphicOptions","notation",NOTATION);
config.put("GraphicOptions","display",DISPLAY);
config.put("GraphicOptions","orientation",ORIENTATION);
config.put("GraphicOptions","show_info",SHOW_INFO);
config.put("GraphicOptions","scale_canvas",SCALE_CANVAS);
config.put("GraphicOptions","collapse_multiple_antennae",COLLAPSE_MULTIPLE_ANTENNAE);
config.put("GraphicOptions","show_masses_canvas",SHOW_MASSES_CANVAS);
config.put("GraphicOptions","show_masses",SHOW_MASSES);
config.put("GraphicOptions","show_redend",SHOW_REDEND);
config.put("GraphicOptions","show_info_custom",SHOW_INFO_CUSTOM);
config.put("GraphicOptions","node_size_custom",NODE_SIZE_CUSTOM);
config.put("GraphicOptions","node_font_size_custom",NODE_FONT_SIZE_CUSTOM);
config.put("GraphicOptions","node_font_face_custom",NODE_FONT_FACE_CUSTOM);
config.put("GraphicOptions","composition_font_size_custom",COMPOSITION_FONT_SIZE_CUSTOM);
config.put("GraphicOptions","composition_font_face_custom",COMPOSITION_FONT_FACE_CUSTOM);
config.put("GraphicOptions","linkage_info_size_custom",LINKAGE_INFO_SIZE_CUSTOM);
config.put("GraphicOptions","linkage_info_font_face_custom",LINKAGE_INFO_FONT_FACE_CUSTOM);
config.put("GraphicOptions","node_space_custom",NODE_SPACE_CUSTOM);
config.put("GraphicOptions","node_sub_space_custom",NODE_SUB_SPACE_CUSTOM);
config.put("GraphicOptions","structures_space_custom",STRUCTURES_SPACE_CUSTOM);
config.put("GraphicOptions","mass_text_space_custom",MASS_TEXT_SPACE_CUSTOM);
config.put("GraphicOptions","mass_text_size_custom",MASS_TEXT_SIZE_CUSTOM);
config.put("GraphicOptions","mass_text_font_face_custom",MASS_TEXT_FONT_FACE_CUSTOM);
config.put("GraphicOptions", "theme", THEME);
}
/**
Retrieve the options from the configuration
*/
public void retrieve(Configuration config) {
NOTATION = config.get("GraphicOptions","notation",NOTATION);
DISPLAY = config.get("GraphicOptions","display",DISPLAY);
ORIENTATION = config.get("GraphicOptions","orientation",ORIENTATION);
SHOW_INFO = config.get("GraphicOptions","show_info",SHOW_INFO);
SCALE_CANVAS = config.get("GraphicOptions","scale_canvas",SCALE_CANVAS);
COLLAPSE_MULTIPLE_ANTENNAE = config.get("GraphicOptions","collapse_multiple_antennae",COLLAPSE_MULTIPLE_ANTENNAE);
SHOW_MASSES_CANVAS = config.get("GraphicOptions","show_masses_canvas",SHOW_MASSES_CANVAS);
SHOW_MASSES = config.get("GraphicOptions","show_masses",SHOW_MASSES);
SHOW_REDEND = config.get("GraphicOptions","show_redend",SHOW_REDEND);
SHOW_INFO_CUSTOM = config.get("GraphicOptions","show_info_custom",SHOW_INFO_CUSTOM);
NODE_SIZE_CUSTOM = config.get("GraphicOptions","node_size_custom",NODE_SIZE_CUSTOM);
NODE_FONT_SIZE_CUSTOM = config.get("GraphicOptions","node_font_size_custom",NODE_FONT_SIZE_CUSTOM);
NODE_FONT_FACE_CUSTOM = config.get("GraphicOptions","node_font_face_custom",NODE_FONT_FACE_CUSTOM);
COMPOSITION_FONT_SIZE_CUSTOM = config.get("GraphicOptions","composition_font_size_custom",COMPOSITION_FONT_SIZE_CUSTOM);
COMPOSITION_FONT_FACE_CUSTOM = config.get("GraphicOptions","composition_font_face_custom",COMPOSITION_FONT_FACE_CUSTOM);
LINKAGE_INFO_SIZE_CUSTOM = config.get("GraphicOptions","linkage_info_size_custom",LINKAGE_INFO_SIZE_CUSTOM);
LINKAGE_INFO_FONT_FACE_CUSTOM = config.get("GraphicOptions","linkage_info_font_face_custom",LINKAGE_INFO_FONT_FACE_CUSTOM);
NODE_SPACE_CUSTOM = config.get("GraphicOptions","node_space_custom",NODE_SPACE_CUSTOM);
NODE_SUB_SPACE_CUSTOM = config.get("GraphicOptions","node_sub_space_custom",NODE_SUB_SPACE_CUSTOM);
STRUCTURES_SPACE_CUSTOM = config.get("GraphicOptions","structures_space_custom",STRUCTURES_SPACE_CUSTOM);
MASS_TEXT_SPACE_CUSTOM = config.get("GraphicOptions","mass_text_space_custom",MASS_TEXT_SPACE_CUSTOM);
MASS_TEXT_SIZE_CUSTOM = config.get("GraphicOptions","mass_text_size_custom",MASS_TEXT_SIZE_CUSTOM);
MASS_TEXT_FONT_FACE_CUSTOM = config.get("GraphicOptions","mass_text_font_face_custom",MASS_TEXT_FONT_FACE_CUSTOM);
THEME=config.get("GraphicOptions", "theme",THEME);
}
/**
Create a copy of the object.
*/
public GraphicOptions clone() {
GraphicOptions ret = new GraphicOptions();
ret.copy(this);
return ret;
}
/**
Copy the values from another GraphicOptions object.
*/
public void copy(GraphicOptions other) {
this.NOTATION = other.NOTATION;
this.DISPLAY = other.DISPLAY;
this.ORIENTATION = other.ORIENTATION;
this.SCALE_CANVAS = other.SCALE_CANVAS;
this.COLLAPSE_MULTIPLE_ANTENNAE = other.COLLAPSE_MULTIPLE_ANTENNAE;
this.SHOW_MASSES_CANVAS = other.SHOW_MASSES_CANVAS;
this.SHOW_MASSES = other.SHOW_MASSES;
this.SHOW_REDEND = other.SHOW_REDEND;
this.SHOW_INFO = other.SHOW_INFO;
this.MARGIN_LEFT = other.MARGIN_LEFT;
this.MARGIN_TOP = other.MARGIN_TOP;
this.MARGIN_RIGHT = other.MARGIN_RIGHT;
this.MARGIN_BOTTOM = other.MARGIN_BOTTOM;
this.NODE_SIZE = other.NODE_SIZE;
this.NODE_FONT_SIZE = other.NODE_FONT_SIZE;
this.NODE_FONT_FACE = other.NODE_FONT_FACE;
this.COMPOSITION_FONT_SIZE = other.COMPOSITION_FONT_SIZE;
this.COMPOSITION_FONT_FACE = other.COMPOSITION_FONT_FACE;
this.LINKAGE_INFO_SIZE = other.LINKAGE_INFO_SIZE;
this.LINKAGE_INFO_FONT_FACE = other.LINKAGE_INFO_FONT_FACE;
this.NODE_SPACE = other.NODE_SPACE;
this.NODE_SUB_SPACE = other.NODE_SUB_SPACE;
this.STRUCTURES_SPACE = other.STRUCTURES_SPACE;
this.MASS_TEXT_SPACE = other.MASS_TEXT_SPACE;
this.MASS_TEXT_SIZE = other.MASS_TEXT_SIZE;
this.MASS_TEXT_FONT_FACE = other.MASS_TEXT_FONT_FACE;
this.SHOW_INFO_CUSTOM = other.SHOW_INFO_CUSTOM;
this.NODE_SIZE_CUSTOM = other.NODE_SIZE_CUSTOM;
this.NODE_FONT_SIZE_CUSTOM = other.NODE_FONT_SIZE_CUSTOM;
this.NODE_FONT_FACE_CUSTOM = other.NODE_FONT_FACE_CUSTOM;
this.COMPOSITION_FONT_SIZE_CUSTOM = other.COMPOSITION_FONT_SIZE_CUSTOM;
this.COMPOSITION_FONT_FACE_CUSTOM = other.COMPOSITION_FONT_FACE_CUSTOM;
this.LINKAGE_INFO_SIZE_CUSTOM = other.LINKAGE_INFO_SIZE_CUSTOM;
this.LINKAGE_INFO_FONT_FACE_CUSTOM = other.LINKAGE_INFO_FONT_FACE_CUSTOM;
this.NODE_SPACE_CUSTOM = other.NODE_SPACE_CUSTOM;
this.NODE_SUB_SPACE_CUSTOM = other.NODE_SUB_SPACE_CUSTOM;
this.STRUCTURES_SPACE_CUSTOM = other.STRUCTURES_SPACE_CUSTOM;
this.MASS_TEXT_SPACE_CUSTOM = other.MASS_TEXT_SPACE_CUSTOM;
this.MASS_TEXT_SIZE_CUSTOM = other.MASS_TEXT_SIZE_CUSTOM;
this.MASS_TEXT_FONT_FACE_CUSTOM = other.MASS_TEXT_FONT_FACE_CUSTOM;
this.SCALE = other.SCALE;
this.THEME=other.THEME;
}
}