/* * EuroCarbDB, a framework for carbohydrate bioinformatics * * Copyright (c) 2006-2009, Eurocarb project, or third-party contributors as * indicated by the @author tags or express copyright attribution * statements applied by the authors. * * This copyrighted material is made available to anyone wishing to use, modify, * copy, or redistribute it subject to the terms and conditions of the GNU * Lesser General Public License, as published by the Free Software Foundation. * A copy of this license accompanies this distribution in the file LICENSE.txt. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY * or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License * for more details. * * Last commit: $Rev: 1549 $ by $Author: glycoslave $ on $Date:: 2009-07-19 #$ */ package org.eurocarbdb.action.hplc; import java.util.Set; import java.util.List; import org.eurocarbdb.action.*; import org.eurocarbdb.dataaccess.*; import org.eurocarbdb.dataaccess.hplc.*; import com.opensymphony.xwork.Action; import com.opensymphony.xwork.Preparable; import static org.eurocarbdb.dataaccess.Eurocarb.getEntityManager; public class meeting extends EurocarbAction { private Profile parent = null; private List<HplcPeaksAnnotated> annotated; private Set<HplcPeaksAnnotated> peaks; private int parent_id; private int digest_id; public String execute() throws Exception { if ( params.isEmpty() ) return INPUT; annotated = getEntityManager().getQuery("org.eurocarbdb.dataaccess.hplc.HplcPeaksAnnotated.PROFILE_DIGEST") .list(); return SUCCESS; } public Set<HplcPeaksAnnotated> getPeaks() { return peaks; } public List<HplcPeaksAnnotated> getHplcPeaksAnnotated() { return annotated; } public void setHplcPeaksAnnotated( List<HplcPeaksAnnotated> annotated) { this.annotated = annotated; } /*public Collection getPeaks() { } */ public List getAnnotated() { return this.annotated; } public Profile getProfile() { return parent; } public void setProfile (Profile parent) { this.parent = parent; } public int getProfileId() { return this.parent_id; } public void setProfileId( int id ) { this.parent_id = id; } public int getDigestId() { return this.digest_id; } public void setDigestId( int id ) { this.digest_id = id; } }