/*
* This file is part of ADDIS (Aggregate Data Drug Information System).
* ADDIS is distributed from http://drugis.org/.
* Copyright © 2009 Gert van Valkenhoef, Tommi Tervonen.
* Copyright © 2010 Gert van Valkenhoef, Tommi Tervonen, Tijs Zwinkels,
* Maarten Jacobs, Hanno Koeslag, Florin Schimbinschi, Ahmad Kamal, Daniel
* Reid.
* Copyright © 2011 Gert van Valkenhoef, Ahmad Kamal, Daniel Reid, Florin
* Schimbinschi.
* Copyright © 2012 Gert van Valkenhoef, Daniel Reid, Joël Kuiper, Wouter
* Reckman.
* Copyright © 2013 Gert van Valkenhoef, Joël Kuiper.
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
package org.drugis.addis.entities.relativeeffect;
import org.apache.commons.math3.distribution.TDistribution;
import org.drugis.common.beans.AbstractObservable;
public abstract class TransformedStudentTBase extends AbstractObservable implements Distribution {
protected final double d_mu;
protected final double d_sigma;
protected final int d_degreesOfFreedom;
protected final TDistribution d_dist;
public TransformedStudentTBase(double mu, double sigma, int degreesOfFreedom) {
if (Double.isNaN(mu)) throw new IllegalArgumentException("mu may not be NaN");
if (Double.isNaN(sigma)) throw new IllegalArgumentException("sigma may not be NaN");
if (sigma < 0.0) throw new IllegalArgumentException("sigma must be >= 0.0");
if (degreesOfFreedom < 1) throw new IllegalArgumentException("degreesOfFreedom must be >= 1");
d_mu = mu;
d_sigma = sigma;
d_degreesOfFreedom = degreesOfFreedom;
d_dist = new TDistribution(getDegreesOfFreedom());
}
protected double calculateQuantile(double p) {
return d_dist.inverseCumulativeProbability(p) * d_sigma + d_mu;
}
protected double calculateCumulativeProbability(double x) {
return d_dist.cumulativeProbability((x - d_mu) / d_sigma);
}
public double getMu() {
return d_mu;
}
public double getSigma() {
return d_sigma;
}
public int getDegreesOfFreedom() {
return d_degreesOfFreedom;
}
@Override
public boolean equals(Object o) {
if(o instanceof TransformedStudentTBase) {
TransformedStudentTBase other = (TransformedStudentTBase) o;
return canEqual(other) && other.d_mu == d_mu && other.d_sigma == d_sigma && other.d_degreesOfFreedom == d_degreesOfFreedom;
}
return false;
}
@Override
public int hashCode() {
return ((Double)d_mu).hashCode() + 31 * ((Double)d_sigma).hashCode() + 31 * 31 * ((Integer) d_degreesOfFreedom).hashCode();
}
protected abstract boolean canEqual(TransformedStudentTBase other);
}