/* * This file is part of ADDIS (Aggregate Data Drug Information System). * ADDIS is distributed from http://drugis.org/. * Copyright © 2009 Gert van Valkenhoef, Tommi Tervonen. * Copyright © 2010 Gert van Valkenhoef, Tommi Tervonen, Tijs Zwinkels, * Maarten Jacobs, Hanno Koeslag, Florin Schimbinschi, Ahmad Kamal, Daniel * Reid. * Copyright © 2011 Gert van Valkenhoef, Ahmad Kamal, Daniel Reid, Florin * Schimbinschi. * Copyright © 2012 Gert van Valkenhoef, Daniel Reid, Joël Kuiper, Wouter * Reckman. * Copyright © 2013 Gert van Valkenhoef, Joël Kuiper. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. */ package org.drugis.addis.entities.relativeeffect; import org.apache.commons.math3.distribution.TDistribution; import org.drugis.common.beans.AbstractObservable; public abstract class TransformedStudentTBase extends AbstractObservable implements Distribution { protected final double d_mu; protected final double d_sigma; protected final int d_degreesOfFreedom; protected final TDistribution d_dist; public TransformedStudentTBase(double mu, double sigma, int degreesOfFreedom) { if (Double.isNaN(mu)) throw new IllegalArgumentException("mu may not be NaN"); if (Double.isNaN(sigma)) throw new IllegalArgumentException("sigma may not be NaN"); if (sigma < 0.0) throw new IllegalArgumentException("sigma must be >= 0.0"); if (degreesOfFreedom < 1) throw new IllegalArgumentException("degreesOfFreedom must be >= 1"); d_mu = mu; d_sigma = sigma; d_degreesOfFreedom = degreesOfFreedom; d_dist = new TDistribution(getDegreesOfFreedom()); } protected double calculateQuantile(double p) { return d_dist.inverseCumulativeProbability(p) * d_sigma + d_mu; } protected double calculateCumulativeProbability(double x) { return d_dist.cumulativeProbability((x - d_mu) / d_sigma); } public double getMu() { return d_mu; } public double getSigma() { return d_sigma; } public int getDegreesOfFreedom() { return d_degreesOfFreedom; } @Override public boolean equals(Object o) { if(o instanceof TransformedStudentTBase) { TransformedStudentTBase other = (TransformedStudentTBase) o; return canEqual(other) && other.d_mu == d_mu && other.d_sigma == d_sigma && other.d_degreesOfFreedom == d_degreesOfFreedom; } return false; } @Override public int hashCode() { return ((Double)d_mu).hashCode() + 31 * ((Double)d_sigma).hashCode() + 31 * 31 * ((Integer) d_degreesOfFreedom).hashCode(); } protected abstract boolean canEqual(TransformedStudentTBase other); }