/* * This file is part of ADDIS (Aggregate Data Drug Information System). * ADDIS is distributed from http://drugis.org/. * Copyright © 2009 Gert van Valkenhoef, Tommi Tervonen. * Copyright © 2010 Gert van Valkenhoef, Tommi Tervonen, Tijs Zwinkels, * Maarten Jacobs, Hanno Koeslag, Florin Schimbinschi, Ahmad Kamal, Daniel * Reid. * Copyright © 2011 Gert van Valkenhoef, Ahmad Kamal, Daniel Reid, Florin * Schimbinschi. * Copyright © 2012 Gert van Valkenhoef, Daniel Reid, Joël Kuiper, Wouter * Reckman. * Copyright © 2013 Gert van Valkenhoef, Joël Kuiper. * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. */ package org.drugis.addis.entities.relativeeffect; import org.apache.commons.math3.distribution.NormalDistribution; import org.drugis.common.beans.AbstractObservable; public abstract class GaussianBase extends AbstractObservable implements Distribution { private double d_mu; private double d_sigma; private NormalDistribution d_dist; public GaussianBase(double mu, double sigma) { if (Double.isNaN(mu)) throw new IllegalArgumentException("mu may not be NaN"); if (Double.isNaN(sigma)) throw new IllegalArgumentException("sigma may not be NaN"); if (sigma < 0.0) throw new IllegalArgumentException("sigma must be >= 0.0"); d_mu = mu; d_sigma = sigma; if (getSigma() != 0.0) { d_dist = new NormalDistribution(d_mu, d_sigma); } } protected double calculateQuantile(double p) { if (getSigma() == 0.0) { return getMu(); } return d_dist.inverseCumulativeProbability(p); } protected double calculateCumulativeProbability(double x) { return d_dist.cumulativeProbability(x); } public double getSigma() { return d_sigma; } public double getMu() { return d_mu; } public GaussianBase plus(GaussianBase other) { if (!canEqual(other)) throw new IllegalArgumentException( "Cannot add together " + getClass().getSimpleName() + " and " + other.getClass().getSimpleName()); return newInstance(getMu() + other.getMu(), Math.sqrt(getSigma() * getSigma() + other.getSigma() * other.getSigma())); } protected abstract GaussianBase newInstance(double mu, double sigma); abstract protected boolean canEqual(GaussianBase other); @Override public boolean equals(Object obj) { if (obj instanceof GaussianBase) { GaussianBase other = (GaussianBase) obj; return canEqual(other) && d_mu == other.d_mu && d_sigma == other.d_sigma; } return false; } @Override public int hashCode() { return ((Double)d_mu).hashCode() + 31 * ((Double)d_sigma).hashCode(); } @Override public String toString() { return getClass().getSimpleName() + "(mu=" + getMu() + ", sigma=" + getSigma() + ")"; } }