/*
* Copyright (C) 2011-2012 Dr. John Lindsay <jlindsay@uoguelph.ca>
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
package plugins;
import java.util.Date;
import whitebox.geospatialfiles.WhiteboxRaster;
import whitebox.interfaces.WhiteboxPlugin;
import whitebox.interfaces.WhiteboxPluginHost;
/**
* This tool can be used to fill all of the depressions in a digital elevation model (DEM) and to remove the flat areas and is most suitable for handling very large DEMs.
*
* @author Dr. John Lindsay email: jlindsay@uoguelph.ca
*/
public class FillDepressionsPandD implements WhiteboxPlugin {
private WhiteboxPluginHost myHost = null;
private String[] args;
/**
* Used to retrieve the plugin tool's name. This is a short, unique name
* containing no spaces.
*
* @return String containing plugin name.
*/
@Override
public String getName() {
return "FillDepressionsPandD";
}
/**
* Used to retrieve the plugin tool's descriptive name. This can be a longer
* name (containing spaces) and is used in the interface to list the tool.
*
* @return String containing the plugin descriptive name.
*/
@Override
public String getDescriptiveName() {
return "Fill Depressions (Planchon and Darboux)";
}
/**
* Used to retrieve a short description of what the plugin tool does.
*
* @return String containing the plugin's description.
*/
@Override
public String getToolDescription() {
return "Fills depressions in a DEM using the Planchon and Darboux (2001) method.";
}
/**
* Used to identify which toolboxes this plugin tool should be listed in.
*
* @return Array of Strings.
*/
@Override
public String[] getToolbox() {
String[] ret = {"DEMPreprocessing"};
return ret;
}
/**
* Sets the WhiteboxPluginHost to which the plugin tool is tied. This is the
* class that the plugin will send all feedback messages, progress updates,
* and return objects.
*
* @param host The WhiteboxPluginHost that called the plugin tool.
*/
@Override
public void setPluginHost(WhiteboxPluginHost host) {
myHost = host;
}
/**
* Used to communicate feedback pop-up messages between a plugin tool and
* the main Whitebox user-interface.
*
* @param feedback String containing the text to display.
*/
private void showFeedback(String message) {
if (myHost != null) {
myHost.showFeedback(message);
} else {
System.out.println(message);
}
}
/**
* Used to communicate a return object from a plugin tool to the main
* Whitebox user-interface.
*
* @return Object, such as an output WhiteboxRaster.
*/
private void returnData(Object ret) {
if (myHost != null) {
myHost.returnData(ret);
}
}
private int previousProgress = 0;
private String previousProgressLabel = "";
/**
* Used to communicate a progress update between a plugin tool and the main
* Whitebox user interface.
*
* @param progressLabel A String to use for the progress label.
* @param progress Float containing the progress value (between 0 and 100).
*/
private void updateProgress(String progressLabel, int progress) {
if (myHost != null && ((progress != previousProgress)
|| (!progressLabel.equals(previousProgressLabel)))) {
myHost.updateProgress(progressLabel, progress);
}
previousProgress = progress;
previousProgressLabel = progressLabel;
}
/**
* Used to communicate a progress update between a plugin tool and the main
* Whitebox user interface.
*
* @param progress Float containing the progress value (between 0 and 100).
*/
private void updateProgress(int progress) {
if (myHost != null && progress != previousProgress) {
myHost.updateProgress(progress);
}
previousProgress = progress;
}
/**
* Sets the arguments (parameters) used by the plugin.
*
* @param args An array of string arguments.
*/
@Override
public void setArgs(String[] args) {
this.args = args.clone();
}
private boolean cancelOp = false;
/**
* Used to communicate a cancel operation from the Whitebox GUI.
*
* @param cancel Set to true if the plugin should be canceled.
*/
@Override
public void setCancelOp(boolean cancel) {
cancelOp = cancel;
}
private void cancelOperation() {
showFeedback("Operation cancelled.");
updateProgress("Progress: ", 0);
}
private boolean amIActive = false;
/**
* Used by the Whitebox GUI to tell if this plugin is still running.
*
* @return a boolean describing whether or not the plugin is actively being
* used.
*/
@Override
public boolean isActive() {
return amIActive;
}
/**
* Used to execute this plugin tool.
*/
@Override
public void run() {
amIActive = true;
String inputHeader;
String outputHeader;
int row, col;
int progress = 0;
double z, w, wN;
int i, n;
int[] dX = {1, 1, 1, 0, -1, -1, -1, 0};
int[] dY = {-1, 0, 1, 1, 1, 0, -1, -1};
double largeValue = Float.MAX_VALUE;
double smallValue = 0.0001;
boolean somethingDone;
int loopNum = 1;
if (args.length <= 0) {
showFeedback("Plugin parameters have not been set.");
return;
}
inputHeader = args[0];
outputHeader = args[1];
smallValue = Double.parseDouble(args[2]);
// check to see that the inputHeader and outputHeader are not null.
if ((inputHeader == null) || (outputHeader == null)) {
showFeedback("One or more of the input parameters have not been set properly.");
return;
}
try {
WhiteboxRaster DEM = new WhiteboxRaster(inputHeader, "r");
int rows = DEM.getNumberRows();
int cols = DEM.getNumberColumns();
double noData = DEM.getNoDataValue();
//the input image may use any value for noData, but
//for this application, we must be sure that it is a
//large negative value.
double noDataOutput = -32768.0;
WhiteboxRaster output;
if (smallValue < 0.01 && smallValue > 0) {
output = new WhiteboxRaster(outputHeader, "rw",
inputHeader, WhiteboxRaster.DataType.DOUBLE, largeValue);
} else {
output = new WhiteboxRaster(outputHeader, "rw",
inputHeader, WhiteboxRaster.DataType.FLOAT, largeValue);
}
output.setNoDataValue(noDataOutput);
// copy the data into the output file.
double[] data = null;
for (row = 0; row < rows; row++) {
data = DEM.getRowValues(row);
if (row == 0 || row == (rows - 1)) {
for (col = 0; col < cols; col++) {
if (data[col] != noData) {
output.setValue(row, col, data[col]);
} else {
output.setValue(row, col, noDataOutput);
}
}
} else {
for (col = 0; col < cols; col++) {
z = data[col];
if (z == noData) {
output.setValue(row, col, noDataOutput);
} else {
output.setValue(row, col, z);
break;
}
}
for (col = cols - 1; col >= 0; col--) {
z = data[col];
if (z == noData) {
output.setValue(row, col, noDataOutput);
} else {
output.setValue(row, col, z);
break;
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * row / (rows - 1));
updateProgress("Loop 1:", progress);
}
i = 0; // 'i' will control the order of the scan directions.
do {
loopNum++;
somethingDone = false;
switch (i) {
case 0:
for (row = 1; row < (rows - 1); row++) {
for (col = 1; col < (cols - 1); col++) {
z = DEM.getValue(row, col);
w = output.getValue(row, col);
if (w > z) {
for (n = 0; n < 8; n++) {
wN = output.getValue(row + dY[n], col + dX[n]) + smallValue;
if (z == noData && wN == noDataOutput) {
w = noDataOutput;
output.setValue(row, col, w);
}
if (wN < w) {
if (wN > z) {
output.setValue(row, col, wN);
w = wN;
} else {
output.setValue(row, col, z);
break;
}
somethingDone = true;
}
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * row / (rows - 1));
updateProgress("Loop " + loopNum + ":", progress);
}
break;
case 1:
for (row = (rows - 2); row >= 1; row--) {
for (col = (cols - 2); col >= 1; col--) {
z = DEM.getValue(row, col);
w = output.getValue(row, col);
if (w > z) {
for (n = 0; n < 8; n++) {
wN = output.getValue(row + dY[n], col + dX[n]) + smallValue;
if (z == noData && wN == noDataOutput) {
w = noDataOutput;
output.setValue(row, col, w);
}
if (wN < w) {
if (wN > z) {
output.setValue(row, col, wN);
w = wN;
} else {
output.setValue(row, col, z);
break;
}
somethingDone = true;
}
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * (rows - row) / (rows - 1));
updateProgress("Loop " + loopNum + ":", progress);
}
break;
case 2:
for (row = 1; row < (rows - 1); row++) {
for (col = (cols - 2); col >= 1; col--) {
z = DEM.getValue(row, col);
w = output.getValue(row, col);
if (w > z) {
for (n = 0; n < 8; n++) {
wN = output.getValue(row + dY[n], col + dX[n]) + smallValue;
if (z == noData && wN == noDataOutput) {
w = noDataOutput;
output.setValue(row, col, w);
}
if (wN < w) {
if (wN > z) {
output.setValue(row, col, wN);
w = wN;
} else {
output.setValue(row, col, z);
break;
}
somethingDone = true;
}
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * row / (rows - 1));
updateProgress("Loop " + loopNum + ":", progress);
}
break;
case 3:
for (row = (rows - 2); row >= 1; row--) {
for (col = 1; col < (cols - 1); col++) {
z = DEM.getValue(row, col);
w = output.getValue(row, col);
if (w > z) {
for (n = 0; n < 8; n++) {
wN = output.getValue(row + dY[n], col + dX[n]) + smallValue;
if (z == noData && wN == noDataOutput) {
w = noDataOutput;
output.setValue(row, col, w);
}
if (wN < w) {
if (wN > z) {
output.setValue(row, col, wN);
w = wN;
} else {
output.setValue(row, col, z);
break;
}
somethingDone = true;
}
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * (rows - row) / (rows - 1));
updateProgress("Loop " + loopNum + ":", progress);
}
break;
}
i++;
if (i > 3) {
i = 0;
}
} while (somethingDone);
loopNum++;
double zN;
dX = new int[]{-1, 0, 1, 1, -1};
dY = new int[]{-1, -1, -1, 0, 0};
for (row = 0; row < rows; row++) {
for (col = 0; col < cols; col++) {
z = DEM.getValue(row, col);
if (z == noData && output.getValue(row, col) != noDataOutput) {
for (i = 0; i < 5; i++) {
zN = output.getValue(row + dY[i], col + dX[i]);
if (zN == noDataOutput) {
output.setValue(row, col, noDataOutput);
break;
}
}
}
}
for (col = cols - 1; col >= 0; col--) {
z = DEM.getValue(row, col);
if (z == noData && output.getValue(row, col) != noDataOutput) {
for (i = 0; i < 5; i++) {
zN = output.getValue(row + dY[i], col + dX[i]);
if (zN == noDataOutput) {
output.setValue(row, col, noDataOutput);
break;
}
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * row / (rows - 1));
updateProgress("Loop " + loopNum + ":", progress);
}
loopNum++;
dX = new int[]{-1, 0, 1, 1, -1};
dY = new int[]{1, 1, 1, 0, 0};
for (row = rows - 1; row >= 0; row--) {
for (col = 0; col < cols; col++) {
z = DEM.getValue(row, col);
if (z == noData && output.getValue(row, col) != noDataOutput) {
for (i = 0; i < 5; i++) {
zN = output.getValue(row + dY[i], col + dX[i]);
if (zN == noDataOutput) {
output.setValue(row, col, noDataOutput);
break;
}
}
}
}
for (col = cols - 1; col >= 0; col--) {
z = DEM.getValue(row, col);
if (z == noData && output.getValue(row, col) != noDataOutput) {
for (i = 0; i < 5; i++) {
zN = output.getValue(row + dY[i], col + dX[i]);
if (zN == noDataOutput) {
output.setValue(row, col, noDataOutput);
break;
}
}
}
}
if (cancelOp) {
cancelOperation();
return;
}
progress = (int) (100f * (rows - row) / (rows - 1));
updateProgress("Loop " + loopNum + ":", progress);
}
output.addMetadataEntry("Created by the "
+ getDescriptiveName() + " tool.");
output.addMetadataEntry("Created on " + new Date());
DEM.close();
output.flush();
output.findMinAndMaxVals();
output.close();
// returning a header file string displays the image.
returnData(outputHeader);
} catch (OutOfMemoryError oe) {
myHost.showFeedback("An out-of-memory error has occurred during operation.");
} catch (Exception e) {
myHost.showFeedback("An error has occurred during operation. See log file for details.");
myHost.logException("Error in " + getDescriptiveName(), e);
} finally {
updateProgress("Progress: ", 0);
// tells the main application that this process is completed.
amIActive = false;
myHost.pluginComplete();
}
}
}