/*
* #%L
* org.gitools.heatmap
* %%
* Copyright (C) 2013 - 2014 Universitat Pompeu Fabra - Biomedical Genomics group
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public
* License along with this program. If not, see
* <http://www.gnu.org/licenses/gpl-3.0.html>.
* #L%
*/
package org.gitools.heatmap.header;
import org.gitools.api.matrix.IMatrixLayer;
import org.gitools.matrix.model.hashmatrix.HashMatrix;
import org.gitools.matrix.model.matrix.AnnotationMatrix;
import org.gitools.utils.translators.DoubleTranslator;
@Deprecated
public class ConvertStringToDoubleAdapter extends HashMatrix {
private final AnnotationMatrix annotations;
public ConvertStringToDoubleAdapter(AnnotationMatrix annotations) {
super(annotations.getLayers(), annotations.getRows());
this.annotations = annotations;
}
@Override
public <T> T get(IMatrixLayer<T> layer, String... identifiers) {
return (T) DoubleTranslator.get().stringToValue((String) annotations.get(layer, identifiers));
}
}