/*
* Concept profile generation tool suite
* Copyright (C) 2015 Biosemantics Group, Erasmus University Medical Center,
* Rotterdam, The Netherlands
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published
* by the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>
*/
package org.erasmusmc.peregrine.disambiguator;
import java.io.Serializable;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.erasmusmc.peregrine.ResultConcept;
/**
* Data class describing details of the disambiguation performed on an indexation.
*
* @author martijn
*
*/
public class DisambiguationDetails implements Serializable {
private static final long serialVersionUID = -6170420119244867296L;
/**
* Lists the concepts that were removed during disambiguation.
*/
public List<ResultConcept> removedConcepts = new ArrayList<ResultConcept>();
/**
* Lists, for each concept ID, the evaluations performed for the concept with that ID.
*/
public Map<Integer, List<EvaluationResult>> conceptID2EvaluationResult = new HashMap<Integer, List<EvaluationResult>>();
/**
* Data class describing a single evaluation performed for disambiguation.
*
* @author martijn
*
*/
public static class EvaluationResult implements Serializable {
private static final long serialVersionUID = 1956311580937017106L;
/**
* The unique identifier of the rule. Use the DisambiguatorRuleRegistry to retrieve information about a rule.
*/
public int ruleID;
/**
* The result of the evaluation.
*/
public boolean result;
/**
* A list of extra information about the evaluation. Can be null.
*/
public List<ExtraData> extraDatas;
public EvaluationResult(int ruleID, boolean result){
this.ruleID = ruleID;
this.result = result;
}
public EvaluationResult(int ruleID, boolean result, List<ExtraData> extraDatas){
this.ruleID = ruleID;
this.result = result;
this.extraDatas = extraDatas;
}
/**
* Data class describing the extradata.
*
* @author martijn
*
*/
public static class ExtraData implements Serializable {
private static final long serialVersionUID = -8443078288006090591L;
public static final int TERM_ID = 0;
public static final int KEYWORD = 1;
public static final int OTHER_CONCEPT = 2;
public static String[] typeStrings = new String[]{"TermID", "Keyword","OtherConcept"};
/**
* Specifies the type of extra data. Use typeStrings to convert to a string.
*/
public int type;
/**
* Value of the extra data.
*/
public String value;
public ExtraData(int type, String value){
this.type = type;
this.value = value;
}
}
}
/**
* Combines the information of two disambiguationDetails objects.
* @param disambiguationDetails
*/
public void add(DisambiguationDetails disambiguationDetails){
this.removedConcepts.addAll(disambiguationDetails.removedConcepts);
this.conceptID2EvaluationResult.putAll(disambiguationDetails.conceptID2EvaluationResult);
}
}