/*
* Concept profile generation tool suite
* Copyright (C) 2015 Biosemantics Group, Erasmus University Medical Center,
* Rotterdam, The Netherlands
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published
* by the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>
*/
package org.erasmusmc.conceptprofilegenerator.generators;
import java.util.Set;
import org.erasmusmc.applications.conceptprofileevaluator.SubGroundhogStatistics;
import org.erasmusmc.groundhog.GroundhogStatistics;
import org.erasmusmc.ontology.ConceptProfile;
public abstract class ConceptProfileGenerator {
protected Set<Integer> conceptsToBeFiltered;
protected GroundhogStatistics groundhogStatistics;
public int maxNumberOfConceptsPerProfile = 1000;
public ConceptProfileGenerator(GroundhogStatistics wholeGroundhogStatistics,Set<Integer> conceptsForFiltering){
this.groundhogStatistics = wholeGroundhogStatistics;
this.conceptsToBeFiltered = conceptsForFiltering;
}
public abstract ConceptProfile generateConceptProfile(SubGroundhogStatistics statistics,Integer ownerConcept);
}