/*
* Concept profile generation tool suite
* Copyright (C) 2015 Biosemantics Group, Erasmus University Medical Center,
* Rotterdam, The Netherlands
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published
* by the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>
*/
package org.erasmusmc.concurrency;
import java.util.ArrayList;
import java.util.Iterator;
import java.util.List;
/**
* This class can be used when objects coming from an iterator have to processed, and the results of the processing is a list of objects over which
* you need to iterate. So the input is an iterator over objects of class I, and the output is an iterator over objects of class O. The processInputs method
* must be implemented to consume input and produce a list of outputs (can be size 0). The processing is performed in parallel threads. The sequence of input to
* output is preserved.
* @author schuemie
*
* @param <I> Class of the input objects
* @param <O> Class of the output objects
*/
public abstract class MultiThreadSequenceProcessing<I,O> implements Iterator<O> {
private Iterator<I> inputIterator;
private List<ProcessingThread> threads;
private int threadCursor;
private Iterator<O> outputIterator;
private O buffer;
private boolean noMoreInputs;
public MultiThreadSequenceProcessing(Iterator<I> inputIterator, int nrOfThreads){
this.inputIterator = inputIterator;
threads = new ArrayList<ProcessingThread>(nrOfThreads);
for (int i = 0; i < nrOfThreads; i++){
if (inputIterator.hasNext()){
ProcessingThread thread = new ProcessingThread();
thread.input = inputIterator.next();
threads.add(thread);
thread.proceed();
}
}
threadCursor = 0;
noMoreInputs = false;
outputIterator = getNextOutputIterator();
if (outputIterator != null && outputIterator.hasNext())
buffer = outputIterator.next();
}
private Iterator<O> getNextOutputIterator() {
while (!noMoreInputs){
ProcessingThread thread = threads.get(threadCursor);
if (thread == null)
noMoreInputs = true;
else {
thread.waitUntilFinished();
List<O> output = thread.output;
thread.output = null;
if (inputIterator.hasNext()){
thread.input = inputIterator.next();
thread.proceed();
} else {
thread.terminate();
threads.set(threadCursor, null);
}
threadCursor++;
if (threadCursor == threads.size())
threadCursor = 0;
if (output == null)
System.err.println("asdf");
if (output != null && output.size() != 0)
return output.iterator();
}
}
return null;
}
@Override
public boolean hasNext() {
return (buffer != null);
}
@Override
public O next() {
O next = buffer;
if (outputIterator.hasNext())
buffer = outputIterator.next();
else {
outputIterator = getNextOutputIterator();
if (outputIterator == null)
buffer = null;
else
buffer = outputIterator.next();
}
return next;
}
@Override
public void remove() {
}
public abstract List<O> processInput(I input);
private class ProcessingThread extends BatchProcessingThread {
public I input;
public List<O> output;
@Override
protected void process() {
output = processInput(input);
}
}
}