/*
* Concept profile generation tool suite
* Copyright (C) 2015 Biosemantics Group, Erasmus University Medical Center,
* Rotterdam, The Netherlands
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published
* by the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>
*/
package JochemBuilder.EvaluationScripts;
public class RunChemicalIndexingEvaluation {
public static String home = "/home/khettne/Projects/Jochem/Indexing/";
public static String falsePositivePositionsInFileName = home+"falsePosPositions.txt";
public static String falseNegativePositionsInFileName = home+"falseNegPositions.txt";
public static String truePositivePositionsInFileName = home+"truePosPositions.txt";
public static String analysisResultOutFileName = home+"analysis_results.txt";
public static String corpusFile = "chemicals-test-corpus-01-05-2008.iob";
public static void main(String[] args) {
GetResultsFromChemicalCorpusIndexation analysis = new GetResultsFromChemicalCorpusIndexation();
analysis.run(home, corpusFile, falsePositivePositionsInFileName, falseNegativePositionsInFileName, truePositivePositionsInFileName, analysisResultOutFileName);
AnalysisStratification stratify = new AnalysisStratification();
stratify.run(analysisResultOutFileName);
}
}