/*
* Concept profile generation tool suite
* Copyright (C) 2015 Biosemantics Group, Erasmus University Medical Center,
* Rotterdam, The Netherlands
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published
* by the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>
*/
package org.erasmusmc.dataimport.wikipedia;
import org.erasmusmc.ontology.Concept;
import org.erasmusmc.ontology.OntologyPSFLoader;
import org.erasmusmc.ontology.TermStore;
import org.erasmusmc.peregrine.ConceptPeregrine;
import org.erasmusmc.utilities.StringUtilities;
public class WikiTest {
public static void main(String[] args) {
System.out.println(StringUtilities.now() +"\tLoading");
OntologyPSFLoader loader = new OntologyPSFLoader();
loader.loadFromPSF(WikiOntology.targetOntology);
System.out.println(StringUtilities.now() +"\tInitializing");
int termCount = 0;
for (Concept concept : loader.ontology){
for (TermStore term : concept.getTerms()){
term.caseSensitive = false;
term.orderSensitive = true;
term.normalised = false;
termCount++;
}
}
System.out.println("Concepts: " + loader.ontology.size() + ", terms: " + termCount);
System.out.println(StringUtilities.now() +"\tReleasing");
ConceptPeregrine peregrine = new ConceptPeregrine();
peregrine.destroyOntologyDuringRelease = true;
peregrine.setOntology(loader.ontology);
peregrine.release();
System.out.println(StringUtilities.now() +"\tDone");
}
}