/* * Concept profile generation tool suite * Copyright (C) 2015 Biosemantics Group, Erasmus University Medical Center, * Rotterdam, The Netherlands * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU Affero General Public License as published * by the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <http://www.gnu.org/licenses/> */ /** * @author Ariel Schwartz * @author Gaurav Bhalotia * */ package org.erasmusmc.dataimport.Medline.xmlparsers.medline; import java.sql.Types; import org.erasmusmc.dataimport.Medline.xmlparsers.NodeHandler; public class CommentsCorrections extends NodeHandler{ String pmid; public CommentsCorrections(String pmid, String type) throws Exception{ tableName = "medline_comments_corrections"; xmlNodeName = "CommentsCorrections"; String[] columnNameDef = { "pmid", "ref_pmid", "note", "type", "ref_source" }; columnName = columnNameDef; String[] xmlElementNameDef = { "PPMID", "CommentsCorrections.PMID", /* The parent element in the stack is a variable*/ "CommentsCorrections.Note", "CommentsCorrections.RefType", "CommentsCorrections.RefSource" }; xmlElementName = xmlElementNameDef; int columnTypeDef[] = { Types.INTEGER, Types.INTEGER, Types.VARCHAR, Types.VARCHAR, Types.VARCHAR }; columnType = columnTypeDef; initialize(); /* Add any data that does not come through XML to the hashtable */ putColumnValue("PPMID", pmid); // putColumnValue("Type", type); } }