/**
* (C) Copyright IBM Corp. 2010, 2015
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*/
package com.ibm.bi.dml.runtime.transform;
import java.io.IOException;
import java.util.ArrayList;
import java.util.Collections;
import java.util.Iterator;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.io.ByteWritable;
import org.apache.hadoop.io.IntWritable;
import org.apache.hadoop.io.LongWritable;
import org.apache.hadoop.io.SequenceFile;
import org.apache.hadoop.io.Text;
import org.apache.hadoop.mapred.JobConf;
import org.apache.hadoop.mapred.OutputCollector;
import org.apache.hadoop.mapred.Reducer;
import org.apache.hadoop.mapred.Reporter;
import org.apache.wink.json4j.JSONException;
import com.ibm.bi.dml.runtime.matrix.CSVReblockMR.OffsetCount;
import com.ibm.bi.dml.runtime.matrix.mapred.MRJobConfiguration;
public class GTFMTDReducer implements Reducer<IntWritable, DistinctValue, Text, LongWritable> {
private JobConf _rJob = null;
TfUtils _agents = null;
@Override
public void configure(JobConf job) {
_rJob = job;
try {
String outputDir = MRJobConfiguration.getOutputs(job)[0];
_agents = new TfUtils(job, outputDir);
}
catch(IOException e) { throw new RuntimeException(e); }
catch(JSONException e) { throw new RuntimeException(e); }
}
@Override
public void close() throws IOException {
}
@Override
public void reduce(IntWritable key, Iterator<DistinctValue> values,
OutputCollector<Text, LongWritable> output, Reporter reporter)
throws IOException {
FileSystem fs = FileSystem.get(_rJob);
int colID = key.get();
if(colID < 0)
{
// process mapper output for MV and Bin agents
colID = colID*-1;
_agents.getMVImputeAgent().mergeAndOutputTransformationMetadata(values, _agents.getTfMtdDir(), colID, fs, _agents);
}
else if ( colID == _agents.getNumCols() + 1)
{
// process mapper output for OFFSET_FILE
ArrayList<OffsetCount> list = new ArrayList<OffsetCount>();
while(values.hasNext())
list.add(new OffsetCount(values.next().getOffsetCount()));
long numTfRows = generateOffsetsFile(list);
reporter.incrCounter(MRJobConfiguration.DataTransformCounters.TRANSFORMED_NUM_ROWS, numTfRows);
}
else
{
// process mapper output for Recode agent
_agents.getRecodeAgent().mergeAndOutputTransformationMetadata(values, _agents.getTfMtdDir(), colID, fs, _agents);
}
}
@SuppressWarnings("unchecked")
private long generateOffsetsFile(ArrayList<OffsetCount> list) throws IllegalArgumentException, IOException
{
Collections.sort(list);
@SuppressWarnings("deprecation")
SequenceFile.Writer writer = new SequenceFile.Writer(
FileSystem.get(_rJob), _rJob,
new Path(_agents.getOffsetFile()+"/part-00000"),
ByteWritable.class, OffsetCount.class);
long lineOffset=0;
for(OffsetCount oc: list)
{
long count=oc.count;
oc.count=lineOffset;
writer.append(new ByteWritable((byte)0), oc);
lineOffset+=count;
}
writer.close();
list.clear();
return lineOffset;
}
}