/* * ------------------------------------------------------------------------ * * Copyright (C) 2003 - 2013 * University of Konstanz, Germany and * KNIME GmbH, Konstanz, Germany * Website: http://www.knime.org; Email: contact@knime.org * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License, Version 3, as * published by the Free Software Foundation. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, see <http://www.gnu.org/licenses>. * * Additional permission under GNU GPL version 3 section 7: * * KNIME interoperates with ECLIPSE solely via ECLIPSE's plug-in APIs. * Hence, KNIME and ECLIPSE are both independent programs and are not * derived from each other. Should, however, the interpretation of the * GNU GPL Version 3 ("License") under any applicable laws result in * KNIME and ECLIPSE being a combined program, KNIME GMBH herewith grants * you the additional permission to use and propagate KNIME together with * ECLIPSE with only the license terms in place for ECLIPSE applying to * ECLIPSE and the GNU GPL Version 3 applying for KNIME, provided the * license terms of ECLIPSE themselves allow for the respective use and * propagation of ECLIPSE together with KNIME. * * Additional permission relating to nodes for KNIME that extend the Node * Extension (and in particular that are based on subclasses of NodeModel, * NodeDialog, and NodeView) and that only interoperate with KNIME through * standard APIs ("Nodes"): * Nodes are deemed to be separate and independent programs and to not be * covered works. Notwithstanding anything to the contrary in the * License, the License does not apply to Nodes, you are not required to * license Nodes under the License, and you are granted a license to * prepare and propagate Nodes, in each case even if such Nodes are * propagated with or for interoperation with KNIME. The owner of a Node * may freely choose the license terms applicable to such Node, including * when such Node is propagated with or for interoperation with KNIME. * --------------------------------------------------------------------- * * */ package org.knime.knip.base.nodes.view; import java.util.List; import javax.swing.JPanel; import org.knime.core.data.DataValue; import org.knime.core.data.MissingValue; import org.knime.knip.base.KNIMEKNIPPlugin; import org.knime.knip.base.data.img.ImgPlusValue; import org.knime.knip.base.data.labeling.LabelingValue; import org.knime.knip.base.data.ui.ViewerFactory; import org.knime.knip.cellviewer.interfaces.CellView; import org.knime.knip.cellviewer.interfaces.CellViewFactory; import org.knime.knip.core.awt.ColorLabelingRenderer; import org.knime.knip.core.awt.Real2GreyRenderer; import org.knime.knip.core.data.img.DefaultImgMetadata; import org.knime.knip.core.ui.imgviewer.CombinedImgViewer; import org.knime.knip.core.ui.imgviewer.events.ImgWithMetadataChgEvent; import org.knime.knip.core.ui.imgviewer.events.LabelingWithMetadataChgEvent; import org.knime.knip.core.ui.imgviewer.events.RendererSelectionChgEvent; import org.knime.knip.core.ui.imgviewer.events.ViewClosedEvent; import org.knime.knip.core.ui.imgviewer.panels.providers.ImageRU; import org.knime.knip.core.ui.imgviewer.panels.providers.LabelingRU; import org.knime.knip.core.util.waitingindicator.WaitingIndicatorUtils; import net.imagej.ImgPlusMetadata; import net.imglib2.img.Img; import net.imglib2.img.ImgView; import net.imglib2.type.numeric.RealType; import net.imglib2.view.Views; /** * TODO Auto-generated * * @author <a href="mailto:dietzc85@googlemail.com">Christian Dietz</a> * @author <a href="mailto:horn_martin@gmx.de">Martin Horn</a> * @author <a href="mailto:michael.zinsmaier@googlemail.com">Michael Zinsmaier</a> * @author <a href="mailto:gabriel.einsdorf@uni.kn">Gabriel Einsdorf</a> */ public class CombinedCellViewFactory implements CellViewFactory { /** * {@inheritDoc} */ @Override public CellView createCellView() { return new CellView() { private CombinedImgViewer m_view = null; @Override public JPanel getViewComponent() { if (m_view == null) { m_view = ViewerFactory.createCombinedImgViewer(KNIMEKNIPPlugin.getCacheSizeForBufferedImages()); } return m_view; } @Override public void onClose() { m_view.getEventService().publish(new ViewClosedEvent()); } @Override public void onReset() { // Nothing to do here } @SuppressWarnings("unchecked") @Override public void updateComponent(final List<DataValue> valueToView) { WaitingIndicatorUtils.setWaiting(m_view, true); m_view.clear(); for (DataValue v : valueToView) { if (v instanceof ImgPlusValue) { final ImgPlusValue imgPlusValue = (ImgPlusValue)v; if (imgPlusValue.getMetadata().numDimensions() <= 1) { Img img2d = imgPlusValue.getImgPlus().getImg(); ImgPlusMetadata meta = imgPlusValue.getMetadata(); img2d = ImgView.wrap(Views.addDimension(img2d, 0, 0), img2d.factory()); meta = new DefaultImgMetadata(2); ImageRU ru = new ImageRU(((RealType)img2d.firstElement()).getMinValue()); m_view.addRU(ru); m_view.publishToPrev(new RendererSelectionChgEvent( new Real2GreyRenderer(((RealType)img2d.firstElement()).getMinValue()))); m_view.publishToPrev(new ImgWithMetadataChgEvent<>(img2d, meta)); } else { ImageRU ru = new ImageRU(((RealType)imgPlusValue.getImgPlus().firstElement()).getMinValue()); m_view.addRU(ru); m_view.publishToPrev(new RendererSelectionChgEvent(new Real2GreyRenderer( ((RealType)imgPlusValue.getImgPlus().firstElement()).getMinValue()))); m_view.publishToPrev(new ImgWithMetadataChgEvent<>(imgPlusValue.getImgPlus(), imgPlusValue.getMetadata())); } } else if (v instanceof LabelingValue) { final LabelingValue labValue = (LabelingValue)v; LabelingRU labRU = new LabelingRU(); m_view.addRU(labRU); m_view.publishToPrev(new RendererSelectionChgEvent(new ColorLabelingRenderer<>())); m_view.publishToPrev(new LabelingWithMetadataChgEvent(labValue.getLabeling(), labValue.getLabelingMetadata())); } } m_view.redraw(); WaitingIndicatorUtils.setWaiting(m_view, false); } }; } /** * {@inheritDoc} */ @Override public boolean isCompatible(final List<Class<? extends DataValue>> values) { if (values.size() < 2) { return false; } boolean canHandle = true; for (Class<? extends DataValue> v : values) { if (v != ImgPlusValue.class) { if (v != LabelingValue.class) { if (v != MissingValue.class) { canHandle = false; } } } } return canHandle; } /** * {@inheritDoc} */ @Override public String getCellViewName() { // TODO Auto-generated method stub return "Combined View"; } /** * {@inheritDoc} */ @Override public String getCellViewDescription() { return "A viewer shown when the user selects an interval of rows and columns in the viewer. " + "This viewer combines all images and labelings in the selected interval to one image by rendering them next to each other. " + "Alternatively, the images and labelings can be layed over each other."; } @Override public int getPriority() { return Integer.MAX_VALUE; } }