/*******************************************************************************
* Copyright 2013 Analog Devices, Inc.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
********************************************************************************/
package com.analog.lyric.dimple.solvers.sumproduct.pseudolikelihood;
import java.util.LinkedList;
import org.eclipse.jdt.annotation.Nullable;
/*
* Used to store information about Factors and Variables.
* There is a one-to-one relationship between NodeInfos and variables and factors.
* They store empirical distributions of variables of interest given a set of samples.
*/
public class NodeInfo
{
private SparseJointHistogram _hist;
private @Nullable SparseJointDistribution _dist;
private int [] _indices;
public NodeInfo(int [] indices)
{
//Store the indices of interest
_indices = indices;
//Create a histogram object
_hist = new SparseJointHistogram(_indices.length);
}
//Add one sample from the data set.
public void addSample(int [] allDataIndices)
{
//picks off only the indices of interest from all of the indices
//add this to the histogram.
_hist.add(indicesToRelevantOnes(allDataIndices));
//invalidate the distribution.
_dist = null;
}
//Retrieve a distribution from the histogram.
public SparseJointDistribution getDistribution()
{
SparseJointDistribution dist = _dist;
if (dist == null)
dist = _dist = _hist.getDistribution();
return dist;
}
//Reset counting.
public void reset()
{
_hist = new SparseJointHistogram(_indices.length);
_dist = null;
}
//builds a linked list (for hashing) of the relevant indices.
protected LinkedList<Integer> indicesToRelevantOnes(int [] indices)
{
LinkedList<Integer> ll = new LinkedList<Integer>();
for (Integer i : _indices)
ll.add(indices[i]);
return ll;
}
}