/******************************************************************************* * Copyright 2012 Analog Devices, Inc. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. ********************************************************************************/ package com.analog.lyric.dimple.matlabproxy; import com.analog.lyric.dimple.model.core.Node; import com.analog.lyric.dimple.model.values.Value; import com.analog.lyric.dimple.model.variables.Real; import com.analog.lyric.dimple.model.variables.Variable; import com.analog.lyric.util.misc.Matlab; /* * This class provides vectors of Reals to allow matlab to set multiple inputs * simultaneously. This is important for performance reasons. (MATLAB is slow to * manipulate lots of objects) */ @Matlab(wrapper="Real") public class PRealVariableVector extends PVariableVector { /*-------------- * Construction */ public PRealVariableVector(Real real) { super(new Node [] {real}); } public PRealVariableVector(Node [] nodes) { super(nodes); } /** * @deprecated as of release 0.08 */ @Deprecated public PRealVariableVector(String varType, PRealDomain domain, int numElements) { this(domain, numElements); } public PRealVariableVector(PRealDomain domain, int numElements) { Node [] nodes = new Node[numElements]; for (int i = 0; i < numElements; i++) { Real v = new Real(domain.getModelerObject()); nodes[i] = v; } setNodes(nodes); } public PRealVariableVector(Variable [] variables) { super(variables); } /*----------------- * PObject methods */ @Override public boolean isReal() { return true; } /*--------------------- * PNodeVector methods */ @Override public PNodeVector createNodeVector(Node[] nodes) { return new PRealVariableVector(nodes); } /*----------------------------- * PRealVariableVector methods */ private Real getRealVariable(int index) { return (Real)getModelerNode(index); } public Object [] getBeliefs(int [] indices) { Object [] beliefs = new Object[indices.length]; for (int i = 0; i < indices.length; i++) { beliefs[i] = getRealVariable(indices[i]).getBeliefObject(); } return beliefs; } public double[] getValues(int[] indices) { double[] values = new double[indices.length]; for (int i = 0; i < indices.length; i++) values[i] = getRealVariable(indices[i]).getValue(); return values; } @Deprecated public void setInput(int [] indices, Object factorFunction) { for (int i = 0; i < indices.length; i++) getRealVariable(indices[i]).setInputObject(factorFunction); } public void setFixedValues(int[] indices, double[] fixedValues) { for (int i = 0; i < indices.length; i++) getRealVariable(indices[i]).setPrior(fixedValues[i]); } public double[] getFixedValues(int[] indices) { double[] output = new double[indices.length]; for (int i = 0; i < indices.length; i++) { Value prior = getRealVariable(indices[i]).getPriorValue(); output[i] = prior != null ? prior.getDouble() : Double.NaN; } return output; } public boolean[] hasFixedValue(int[] indices) { boolean[] output = new boolean[indices.length]; for (int i = 0; i < indices.length; i++) output[i] = getRealVariable(indices[i]).hasFixedValue(); return output; } public Object[] getInput(int[] indices) { Object[] output = new Object[size()]; for (int i = 0; i < indices.length; i++) output[i] = getRealVariable(indices[i]).getInput(); return output; } }