package plugins.kernel.roi.descriptor.property;
import icy.plugin.abstract_.Plugin;
import icy.plugin.interface_.PluginROIDescriptor;
import icy.roi.ROI;
import icy.roi.ROIDescriptor;
import icy.sequence.Sequence;
import icy.type.rectangle.Rectangle5D;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
/**
* This {@link PluginROIDescriptor} implements the size ROI descriptors:<br/>
* <li>Size X (in pixel)</li><br/>
* <li>Size Y (in pixel)</li><br/>
* <li>Size C (in pixel)</li><br/>
* <li>Size Z (in pixel)</li><br/>
* <li>Size T (in pixel)</li>
*
* @author Stephane
*/
public class ROISizeDescriptorsPlugin extends Plugin implements PluginROIDescriptor
{
public static final String ID_SIZE_X = ROISizeXDescriptor.ID;
public static final String ID_SIZE_Y = ROISizeYDescriptor.ID;
public static final String ID_SIZE_Z = ROISizeZDescriptor.ID;
public static final String ID_SIZE_T = ROISizeTDescriptor.ID;
public static final String ID_SIZE_C = ROISizeCDescriptor.ID;
public static final ROISizeXDescriptor sizeXDescriptor = new ROISizeXDescriptor();
public static final ROISizeYDescriptor sizeYDescriptor = new ROISizeYDescriptor();
public static final ROISizeZDescriptor sizeZDescriptor = new ROISizeZDescriptor();
public static final ROISizeTDescriptor sizeTDescriptor = new ROISizeTDescriptor();
public static final ROISizeCDescriptor sizeCDescriptor = new ROISizeCDescriptor();
@Override
public List<ROIDescriptor> getDescriptors()
{
final List<ROIDescriptor> result = new ArrayList<ROIDescriptor>();
result.add(sizeXDescriptor);
result.add(sizeYDescriptor);
result.add(sizeZDescriptor);
result.add(sizeTDescriptor);
result.add(sizeCDescriptor);
return result;
}
@Override
public Map<ROIDescriptor, Object> compute(ROI roi, Sequence sequence) throws UnsupportedOperationException
{
final Map<ROIDescriptor, Object> result = new HashMap<ROIDescriptor, Object>();
try
{
// compute size descriptors
final Rectangle5D size = roi.getBounds5D();
result.put(sizeXDescriptor, Double.valueOf(ROISizeXDescriptor.getSizeX(size)));
result.put(sizeYDescriptor, Double.valueOf(ROISizeYDescriptor.getSizeY(size)));
result.put(sizeZDescriptor, Double.valueOf(ROISizeZDescriptor.getSizeZ(size)));
result.put(sizeTDescriptor, Double.valueOf(ROISizeTDescriptor.getSizeT(size)));
result.put(sizeCDescriptor, Double.valueOf(ROISizeCDescriptor.getSizeC(size)));
}
catch (Exception e)
{
final String mess = getClass().getSimpleName() + ": cannot compute descriptors for '" + roi.getName() + "'";
throw new UnsupportedOperationException(mess, e);
}
return result;
}
}