/* * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program; if not, write to the Free Software * Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA. */ /* * VisualizePanel.java * Copyright (C) 1999 University of Waikato, Hamilton, New Zealand * */ package weka.gui.visualize; import weka.core.Attribute; import weka.core.FastVector; import weka.core.Instance; import weka.core.Instances; import weka.gui.ExtensionFileFilter; import weka.gui.Logger; import java.awt.BorderLayout; import java.awt.Color; import java.awt.Component; import java.awt.Dimension; import java.awt.Graphics; import java.awt.GridBagConstraints; import java.awt.GridBagLayout; import java.awt.GridLayout; import java.awt.Insets; import java.awt.event.ActionEvent; import java.awt.event.ActionListener; import java.awt.event.InputEvent; import java.awt.event.MouseAdapter; import java.awt.event.MouseEvent; import java.awt.event.MouseMotionAdapter; import java.io.BufferedReader; import java.io.BufferedWriter; import java.io.File; import java.io.FileReader; import java.io.FileWriter; import java.io.Writer; import java.util.Random; import javax.swing.BorderFactory; import javax.swing.DefaultComboBoxModel; import javax.swing.JButton; import javax.swing.JComboBox; import javax.swing.JFileChooser; import javax.swing.JFrame; import javax.swing.JLabel; import javax.swing.JOptionPane; import javax.swing.JPanel; import javax.swing.JSlider; import javax.swing.SwingConstants; import javax.swing.event.ChangeEvent; import javax.swing.event.ChangeListener; import javax.swing.filechooser.FileFilter; /** * This panel allows the user to visualize a dataset (and if provided) a * classifier's/clusterer's predictions in two dimensions. * * If the user selects a nominal attribute as the colouring attribute then * each point is drawn in a colour that corresponds to the discrete value * of that attribute for the instance. If the user selects a numeric * attribute to colour on, then the points are coloured using a spectrum * ranging from blue to red (low values to high). * * When a classifier's predictions are supplied they are plotted in one * of two ways (depending on whether the class is nominal or numeric).<br> * For nominal class: an error made by a classifier is plotted as a square * in the colour corresponding to the class it predicted.<br> * For numeric class: predictions are plotted as varying sized x's, where * the size of the x is related to the magnitude of the error. * * @author Mark Hall (mhall@cs.waikato.ac.nz) * @author Malcolm Ware (mfw4@cs.waikato.ac.nz) * @version $Revision: 6889 $ */ public class VisualizePanel extends PrintablePanel { /** for serialization */ private static final long serialVersionUID = 240108358588153943L; /** Inner class to handle plotting */ protected class PlotPanel extends PrintablePanel implements Plot2DCompanion { /** for serialization */ private static final long serialVersionUID = -4823674171136494204L; /** The actual generic plotting panel */ protected Plot2D m_plot2D = new Plot2D(); /** The instances from the master plot */ protected Instances m_plotInstances=null; /** The master plot */ protected PlotData2D m_originalPlot=null; /** Indexes of the attributes to go on the x and y axis and the attribute to use for colouring and the current shape for drawing */ protected int m_xIndex=0; protected int m_yIndex=0; protected int m_cIndex=0; protected int m_sIndex=0; /**the offsets of the axes once label metrics are calculated */ private int m_XaxisStart=0; private int m_YaxisStart=0; private int m_XaxisEnd=0; private int m_YaxisEnd=0; /** True if the user is currently dragging a box. */ private boolean m_createShape; /** contains all the shapes that have been drawn for these attribs */ private FastVector m_shapes; /** contains the points of the shape currently being drawn. */ private FastVector m_shapePoints; /** contains the position of the mouse (used for rubberbanding). */ private Dimension m_newMousePos; /** Constructor */ public PlotPanel() { this.setBackground(m_plot2D.getBackground()); this.setLayout(new BorderLayout()); this.add(m_plot2D, BorderLayout.CENTER); m_plot2D.setPlotCompanion(this); m_createShape = false; m_shapes = null;//// m_shapePoints = null; m_newMousePos = new Dimension(); this.addMouseListener(new MouseAdapter() { /////// public void mousePressed(MouseEvent e) { if ((e.getModifiers() & MouseEvent.BUTTON1_MASK) == MouseEvent.BUTTON1_MASK) { // if (m_sIndex == 0) { //do nothing it will get dealt to in the clicked method } else if (m_sIndex == 1) { m_createShape = true; m_shapePoints = new FastVector(5); m_shapePoints.addElement(new Double(m_sIndex)); m_shapePoints.addElement(new Double(e.getX())); m_shapePoints.addElement(new Double(e.getY())); m_shapePoints.addElement(new Double(e.getX())); m_shapePoints.addElement(new Double(e.getY())); // Graphics g = PlotPanel.this.getGraphics(); Graphics g = m_plot2D.getGraphics(); g.setColor(Color.black); g.setXORMode(Color.white); g.drawRect(((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(2)).intValue(), ((Double)m_shapePoints.elementAt(3)).intValue() - ((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(4)).intValue() - ((Double)m_shapePoints.elementAt(2)).intValue()); g.dispose(); } //System.out.println("clicked"); } //System.out.println("clicked"); } ////// public void mouseClicked(MouseEvent e) { if ((m_sIndex == 2 || m_sIndex == 3) && (m_createShape || (e.getModifiers() & MouseEvent.BUTTON1_MASK) == MouseEvent.BUTTON1_MASK)) { if (m_createShape) { //then it has been started already. Graphics g = m_plot2D.getGraphics(); g.setColor(Color.black); g.setXORMode(Color.white); if ((e.getModifiers() & MouseEvent.BUTTON1_MASK) == MouseEvent.BUTTON1_MASK && !e.isAltDown()) { m_shapePoints.addElement(new Double(m_plot2D.convertToAttribX(e.getX()))); m_shapePoints.addElement(new Double(m_plot2D.convertToAttribY(e.getY()))); m_newMousePos.width = e.getX(); m_newMousePos.height = e.getY(); g.drawLine((int)Math.ceil (m_plot2D.convertToPanelX (((Double)m_shapePoints. elementAt(m_shapePoints.size() - 2)). doubleValue())), (int)Math.ceil (m_plot2D.convertToPanelY (((Double)m_shapePoints. elementAt(m_shapePoints.size() - 1)). doubleValue())), m_newMousePos.width, m_newMousePos.height); } else if (m_sIndex == 3) { //then extend the lines to infinity //(100000 or so should be enough). //the area is selected by where the user right clicks //the mouse button m_createShape = false; if (m_shapePoints.size() >= 5) { double cx = Math.ceil (m_plot2D.convertToPanelX (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 4)).doubleValue())); double cx2 = Math.ceil (m_plot2D.convertToPanelX (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 2)).doubleValue())) - cx; cx2 *= 50000; double cy = Math.ceil (m_plot2D. convertToPanelY(((Double)m_shapePoints. elementAt(m_shapePoints.size() - 3)). doubleValue())); double cy2 = Math.ceil (m_plot2D.convertToPanelY(((Double)m_shapePoints. elementAt(m_shapePoints.size() - 1)). doubleValue())) - cy; cy2 *= 50000; double cxa = Math.ceil(m_plot2D.convertToPanelX (((Double)m_shapePoints. elementAt(3)). doubleValue())); double cxa2 = Math.ceil(m_plot2D.convertToPanelX (((Double)m_shapePoints. elementAt(1)). doubleValue())) - cxa; cxa2 *= 50000; double cya = Math.ceil (m_plot2D.convertToPanelY (((Double)m_shapePoints.elementAt(4)). doubleValue())); double cya2 = Math.ceil (m_plot2D.convertToPanelY (((Double)m_shapePoints.elementAt(2)). doubleValue())) - cya; cya2 *= 50000; m_shapePoints.setElementAt (new Double(m_plot2D.convertToAttribX(cxa2 + cxa)), 1); m_shapePoints.setElementAt (new Double(m_plot2D.convertToAttribY(cy2 + cy)), m_shapePoints.size() - 1); m_shapePoints.setElementAt (new Double(m_plot2D.convertToAttribX(cx2 + cx)), m_shapePoints.size() - 2); m_shapePoints.setElementAt (new Double(m_plot2D.convertToAttribY(cya2 + cya)), 2); //determine how infinity line should be built cy = Double.POSITIVE_INFINITY; cy2 = Double.NEGATIVE_INFINITY; if (((Double)m_shapePoints.elementAt(1)). doubleValue() > ((Double)m_shapePoints.elementAt(3)). doubleValue()) { if (((Double)m_shapePoints.elementAt(2)). doubleValue() == ((Double)m_shapePoints.elementAt(4)). doubleValue()) { cy = ((Double)m_shapePoints.elementAt(2)). doubleValue(); } } if (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 2)).doubleValue() > ((Double)m_shapePoints.elementAt (m_shapePoints.size() - 4)).doubleValue()) { if (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 3)). doubleValue() == ((Double)m_shapePoints.elementAt (m_shapePoints.size() - 1)).doubleValue()) { cy2 = ((Double)m_shapePoints.lastElement()). doubleValue(); } } m_shapePoints.addElement(new Double(cy)); m_shapePoints.addElement(new Double(cy2)); if (!inPolyline(m_shapePoints, m_plot2D.convertToAttribX (e.getX()), m_plot2D.convertToAttribY(e.getY()))) { Double tmp = (Double)m_shapePoints. elementAt(m_shapePoints.size() - 2); m_shapePoints.setElementAt (m_shapePoints.lastElement(), m_shapePoints.size() - 2); m_shapePoints.setElementAt (tmp, m_shapePoints.size() - 1); } if (m_shapes == null) { m_shapes = new FastVector(4); } m_shapes.addElement(m_shapePoints); m_submit.setText("Submit"); m_submit.setActionCommand("Submit"); m_submit.setEnabled(true); } m_shapePoints = null; PlotPanel.this.repaint(); } else { //then close the shape m_createShape = false; if (m_shapePoints.size() >= 7) { m_shapePoints.addElement(m_shapePoints.elementAt(1)); m_shapePoints.addElement(m_shapePoints.elementAt(2)); if (m_shapes == null) { m_shapes = new FastVector(4); } m_shapes.addElement(m_shapePoints); m_submit.setText("Submit"); m_submit.setActionCommand("Submit"); m_submit.setEnabled(true); } m_shapePoints = null; PlotPanel.this.repaint(); } g.dispose(); //repaint(); } else if ((e.getModifiers() & MouseEvent.BUTTON1_MASK) == MouseEvent.BUTTON1_MASK) { //then this is the first point m_createShape = true; m_shapePoints = new FastVector(17); m_shapePoints.addElement(new Double(m_sIndex)); m_shapePoints.addElement(new Double(m_plot2D.convertToAttribX(e.getX()))); //the new point m_shapePoints.addElement(new Double(m_plot2D.convertToAttribY(e.getY()))); m_newMousePos.width = e.getX(); //the temp mouse point m_newMousePos.height = e.getY(); Graphics g = m_plot2D.getGraphics(); g.setColor(Color.black); g.setXORMode(Color.white); g.drawLine((int)Math.ceil (m_plot2D.convertToPanelX(((Double)m_shapePoints. elementAt(1)).doubleValue())), (int)Math.ceil (m_plot2D.convertToPanelY(((Double)m_shapePoints. elementAt(2)).doubleValue())), m_newMousePos.width, m_newMousePos.height); g.dispose(); } } else { if ((e.getModifiers() & InputEvent.BUTTON1_MASK) == InputEvent.BUTTON1_MASK) { m_plot2D.searchPoints(e.getX(),e.getY(), false); } else { m_plot2D.searchPoints(e.getX(), e.getY(), true); } } } ///////// public void mouseReleased(MouseEvent e) { if (m_createShape) { if (((Double)m_shapePoints.elementAt(0)).intValue() == 1) { m_createShape = false; Graphics g = m_plot2D.getGraphics(); g.setColor(Color.black); g.setXORMode(Color.white); g.drawRect(((Double)m_shapePoints.elementAt(1)). intValue(), ((Double)m_shapePoints.elementAt(2)).intValue(), ((Double)m_shapePoints.elementAt(3)).intValue() - ((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(4)).intValue() - ((Double)m_shapePoints.elementAt(2)).intValue()); g.dispose(); if (checkPoints(((Double)m_shapePoints.elementAt(1)). doubleValue(), ((Double)m_shapePoints.elementAt(2)). doubleValue()) && checkPoints(((Double)m_shapePoints.elementAt(3)). doubleValue(), ((Double)m_shapePoints.elementAt(4)). doubleValue())) { //then the points all land on the screen //now do special check for the rectangle if (((Double)m_shapePoints.elementAt(1)).doubleValue() < ((Double)m_shapePoints.elementAt(3)).doubleValue() && ((Double)m_shapePoints.elementAt(2)).doubleValue() < ((Double)m_shapePoints.elementAt(4)).doubleValue()) { //then the rectangle is valid if (m_shapes == null) { m_shapes = new FastVector(2); } m_shapePoints.setElementAt(new Double(m_plot2D.convertToAttribX(((Double)m_shapePoints. elementAt(1)). doubleValue())), 1); m_shapePoints.setElementAt(new Double(m_plot2D.convertToAttribY(((Double)m_shapePoints. elementAt(2)). doubleValue())), 2); m_shapePoints.setElementAt(new Double(m_plot2D.convertToAttribX(((Double)m_shapePoints. elementAt(3)). doubleValue())), 3); m_shapePoints.setElementAt(new Double(m_plot2D.convertToAttribY(((Double)m_shapePoints. elementAt(4)). doubleValue())), 4); m_shapes.addElement(m_shapePoints); m_submit.setText("Submit"); m_submit.setActionCommand("Submit"); m_submit.setEnabled(true); PlotPanel.this.repaint(); } } m_shapePoints = null; } } } }); this.addMouseMotionListener(new MouseMotionAdapter() { public void mouseDragged(MouseEvent e) { //check if the user is dragging a box if (m_createShape) { if (((Double)m_shapePoints.elementAt(0)).intValue() == 1) { Graphics g = m_plot2D.getGraphics(); g.setColor(Color.black); g.setXORMode(Color.white); g.drawRect(((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(2)).intValue(), ((Double)m_shapePoints.elementAt(3)).intValue() - ((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(4)).intValue() - ((Double)m_shapePoints.elementAt(2)).intValue()); m_shapePoints.setElementAt(new Double(e.getX()), 3); m_shapePoints.setElementAt(new Double(e.getY()), 4); g.drawRect(((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(2)).intValue(), ((Double)m_shapePoints.elementAt(3)).intValue() - ((Double)m_shapePoints.elementAt(1)).intValue(), ((Double)m_shapePoints.elementAt(4)).intValue() - ((Double)m_shapePoints.elementAt(2)).intValue()); g.dispose(); } } } public void mouseMoved(MouseEvent e) { if (m_createShape) { if (((Double)m_shapePoints.elementAt(0)).intValue() == 2 || ((Double)m_shapePoints.elementAt(0)).intValue() == 3) { Graphics g = m_plot2D.getGraphics(); g.setColor(Color.black); g.setXORMode(Color.white); g.drawLine((int)Math.ceil(m_plot2D.convertToPanelX (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 2)). doubleValue())), (int)Math.ceil(m_plot2D.convertToPanelY (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 1)). doubleValue())), m_newMousePos.width, m_newMousePos.height); m_newMousePos.width = e.getX(); m_newMousePos.height = e.getY(); g.drawLine((int)Math.ceil(m_plot2D.convertToPanelX (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 2)). doubleValue())), (int)Math.ceil(m_plot2D.convertToPanelY (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 1)). doubleValue())), m_newMousePos.width, m_newMousePos.height); g.dispose(); } } } }); m_submit.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { if (e.getActionCommand().equals("Submit")) { if (m_splitListener != null && m_shapes != null) { //then send the split to the listener Instances sub_set1 = new Instances(m_plot2D.getMasterPlot(). m_plotInstances, 500); Instances sub_set2 = new Instances(m_plot2D.getMasterPlot(). m_plotInstances, 500); if (m_plot2D.getMasterPlot(). m_plotInstances != null) { for (int noa = 0 ; noa < m_plot2D.getMasterPlot(). m_plotInstances.numInstances(); noa++) { if (!m_plot2D.getMasterPlot(). m_plotInstances.instance(noa).isMissing(m_xIndex) && !m_plot2D.getMasterPlot(). m_plotInstances.instance(noa).isMissing(m_yIndex)){ if (inSplit(m_plot2D.getMasterPlot(). m_plotInstances.instance(noa))) { sub_set1.add(m_plot2D.getMasterPlot(). m_plotInstances.instance(noa)); } else { sub_set2.add(m_plot2D.getMasterPlot(). m_plotInstances.instance(noa)); } } } FastVector tmp = m_shapes; cancelShapes(); m_splitListener.userDataEvent(new VisualizePanelEvent(tmp, sub_set1, sub_set2, m_xIndex, m_yIndex)); } } else if (m_shapes != null && m_plot2D.getMasterPlot().m_plotInstances != null) { Instances sub_set1 = new Instances(m_plot2D.getMasterPlot(). m_plotInstances, 500); int count = 0; for (int noa = 0 ; noa < m_plot2D.getMasterPlot(). m_plotInstances.numInstances(); noa++) { if (inSplit(m_plot2D.getMasterPlot(). m_plotInstances.instance(noa))) { sub_set1.add(m_plot2D.getMasterPlot(). m_plotInstances.instance(noa)); count++; } } int [] nSizes = null; int [] nTypes = null; int x = m_xIndex; int y = m_yIndex; if (m_originalPlot == null) { //this sets these instances as the instances //to go back to. m_originalPlot = m_plot2D.getMasterPlot(); } if (count > 0) { nTypes = new int[count]; nSizes = new int[count]; count = 0; for (int noa = 0; noa < m_plot2D.getMasterPlot(). m_plotInstances.numInstances(); noa++) { if (inSplit(m_plot2D.getMasterPlot(). m_plotInstances.instance(noa))) { nTypes[count] = m_plot2D.getMasterPlot(). m_shapeType[noa]; nSizes[count] = m_plot2D.getMasterPlot(). m_shapeSize[noa]; count++; } } } cancelShapes(); PlotData2D newPlot = new PlotData2D(sub_set1); try { newPlot.setShapeSize(nSizes); newPlot.setShapeType(nTypes); m_plot2D.removeAllPlots(); VisualizePanel.this.addPlot(newPlot); } catch (Exception ex) { System.err.println(ex); ex.printStackTrace(); } try { VisualizePanel.this.setXIndex(x); VisualizePanel.this.setYIndex(y); } catch(Exception er) { System.out.println("Error : " + er); // System.out.println("Part of user input so had to" + // " catch here"); } } } else if (e.getActionCommand().equals("Reset")) { int x = m_xIndex; int y = m_yIndex; m_plot2D.removeAllPlots(); try { VisualizePanel.this.addPlot(m_originalPlot); } catch (Exception ex) { System.err.println(ex); ex.printStackTrace(); } try { VisualizePanel.this.setXIndex(x); VisualizePanel.this.setYIndex(y); } catch(Exception er) { System.out.println("Error : " + er); } } } }); m_cancel.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { cancelShapes(); PlotPanel.this.repaint(); } }); //////////// } /** * Removes all the plots. */ public void removeAllPlots() { m_plot2D.removeAllPlots(); m_legendPanel.setPlotList(m_plot2D.getPlots()); } /** * @return The FastVector containing all the shapes. */ public FastVector getShapes() { return m_shapes; } /** * Sets the list of shapes to empty and also cancels * the current shape being drawn (if applicable). */ public void cancelShapes() { if (m_splitListener == null) { m_submit.setText("Reset"); m_submit.setActionCommand("Reset"); if (m_originalPlot == null || m_originalPlot.m_plotInstances == m_plotInstances) { m_submit.setEnabled(false); } else { m_submit.setEnabled(true); } } else { m_submit.setEnabled(false); } m_createShape = false; m_shapePoints = null; m_shapes = null; this.repaint(); } /** * This can be used to set the shapes that should appear. * @param v The list of shapes. */ public void setShapes(FastVector v) { //note that this method should be fine for doubles, //but anything else that uses something other than doubles //(or uneditable objects) could have unsafe copies. if (v != null) { FastVector temp; m_shapes = new FastVector(v.size()); for (int noa = 0; noa < v.size(); noa++) { temp = new FastVector(((FastVector)v.elementAt(noa)).size()); m_shapes.addElement(temp); for (int nob = 0; nob < ((FastVector)v.elementAt(noa)).size() ; nob++) { temp.addElement(((FastVector)v.elementAt(noa)).elementAt(nob)); } } } else { m_shapes = null; } this.repaint(); } /** * This will check the values of the screen points passed and make sure * that they land on the screen * @param x1 The x coord. * @param y1 The y coord. * @return true if the point would land on the screen */ private boolean checkPoints(double x1, double y1) { if (x1 < 0 || x1 > this.getSize().width || y1 < 0 || y1 > this.getSize().height) { return false; } return true; } /** * This will check if an instance is inside or outside of the current * shapes. * @param i The instance to check. * @return True if 'i' falls inside the shapes, false otherwise. */ public boolean inSplit(Instance i) { //this will check if the instance lies inside the shapes or not if (m_shapes != null) { FastVector stmp; double x1, y1, x2, y2; for (int noa = 0; noa < m_shapes.size(); noa++) { stmp = (FastVector)m_shapes.elementAt(noa); if (((Double)stmp.elementAt(0)).intValue() == 1) { //then rectangle x1 = ((Double)stmp.elementAt(1)).doubleValue(); y1 = ((Double)stmp.elementAt(2)).doubleValue(); x2 = ((Double)stmp.elementAt(3)).doubleValue(); y2 = ((Double)stmp.elementAt(4)).doubleValue(); if (i.value(m_xIndex) >= x1 && i.value(m_xIndex) <= x2 && i.value(m_yIndex) <= y1 && i.value(m_yIndex) >= y2) { //then is inside split so return true; return true; } } else if (((Double)stmp.elementAt(0)).intValue() == 2) { //then polygon if (inPoly(stmp, i.value(m_xIndex), i.value(m_yIndex))) { return true; } } else if (((Double)stmp.elementAt(0)).intValue() == 3) { //then polyline if (inPolyline(stmp, i.value(m_xIndex), i.value(m_yIndex))) { return true; } } } } return false; } /** * Checks to see if the coordinate passed is inside the ployline * passed, Note that this is done using attribute values and not there * respective screen values. * @param ob The polyline. * @param x The x coord. * @param y The y coord. * @return True if it falls inside the polyline, false otherwise. */ private boolean inPolyline(FastVector ob, double x, double y) { //this works similar to the inPoly below except that //the first and last lines are treated as extending infinite in one //direction and //then infinitly in the x dirction their is a line that will //normaly be infinite but //can be finite in one or both directions int countx = 0; double vecx, vecy; double change; double x1, y1, x2, y2; for (int noa = 1; noa < ob.size() - 4; noa+= 2) { y1 = ((Double)ob.elementAt(noa+1)).doubleValue(); y2 = ((Double)ob.elementAt(noa+3)).doubleValue(); x1 = ((Double)ob.elementAt(noa)).doubleValue(); x2 = ((Double)ob.elementAt(noa+2)).doubleValue(); //System.err.println(y1 + " " + y2 + " " + x1 + " " + x2); vecy = y2 - y1; vecx = x2 - x1; if (noa == 1 && noa == ob.size() - 6) { //then do special test first and last edge if (vecy != 0) { change = (y - y1) / vecy; if (vecx * change + x1 >= x) { //then intersection countx++; } } } else if (noa == 1) { if ((y < y2 && vecy > 0) || (y > y2 && vecy < 0)) { //now just determine intersection or not change = (y - y1) / vecy; if (vecx * change + x1 >= x) { //then intersection on horiz countx++; } } } else if (noa == ob.size() - 6) { //then do special test on last edge if ((y <= y1 && vecy < 0) || (y >= y1 && vecy > 0)) { change = (y - y1) / vecy; if (vecx * change + x1 >= x) { countx++; } } } else if ((y1 <= y && y < y2) || (y2 < y && y <= y1)) { //then continue tests. if (vecy == 0) { //then lines are parallel stop tests in //ofcourse it should never make it this far } else { change = (y - y1) / vecy; if (vecx * change + x1 >= x) { //then intersects on horiz countx++; } } } } //now check for intersection with the infinity line y1 = ((Double)ob.elementAt(ob.size() - 2)).doubleValue(); y2 = ((Double)ob.elementAt(ob.size() - 1)).doubleValue(); if (y1 > y2) { //then normal line if (y1 >= y && y > y2) { countx++; } } else { //then the line segment is inverted if (y1 >= y || y > y2) { countx++; } } if ((countx % 2) == 1) { return true; } else { return false; } } /** * This checks to see if The coordinate passed is inside * the polygon that was passed. * @param ob The polygon. * @param x The x coord. * @param y The y coord. * @return True if the coordinate is in the polygon, false otherwise. */ private boolean inPoly(FastVector ob, double x, double y) { //brief on how this works //it draws a line horizontally from the point to the right (infinitly) //it then sees how many lines of the polygon intersect this, //if it is even then the point is // outside the polygon if it's odd then it's inside the polygon int count = 0; double vecx, vecy; double change; double x1, y1, x2, y2; for (int noa = 1; noa < ob.size() - 2; noa += 2) { y1 = ((Double)ob.elementAt(noa+1)).doubleValue(); y2 = ((Double)ob.elementAt(noa+3)).doubleValue(); if ((y1 <= y && y < y2) || (y2 < y && y <= y1)) { //then continue tests. vecy = y2 - y1; if (vecy == 0) { //then lines are parallel stop tests for this line } else { x1 = ((Double)ob.elementAt(noa)).doubleValue(); x2 = ((Double)ob.elementAt(noa+2)).doubleValue(); vecx = x2 - x1; change = (y - y1) / vecy; if (vecx * change + x1 >= x) { //then add to count as an intersected line count++; } } } } if ((count % 2) == 1) { //then lies inside polygon //System.out.println("in"); return true; } else { //System.out.println("out"); return false; } //System.out.println("WHAT?!?!?!?!!?!??!?!"); //return false; } /** * Set level of jitter and repaint the plot using the new jitter value * @param j the level of jitter */ public void setJitter(int j) { m_plot2D.setJitter(j); } /** * Set the index of the attribute to go on the x axis * @param x the index of the attribute to use on the x axis */ public void setXindex(int x) { // this just ensures that the shapes get disposed of //if the attribs change if (x != m_xIndex) { cancelShapes(); } m_xIndex = x; m_plot2D.setXindex(x); if (m_showAttBars) { m_attrib.setX(x); } // this.repaint(); } /** * Set the index of the attribute to go on the y axis * @param y the index of the attribute to use on the y axis */ public void setYindex(int y) { // this just ensures that the shapes get disposed of //if the attribs change if (y != m_yIndex) { cancelShapes(); } m_yIndex = y; m_plot2D.setYindex(y); if (m_showAttBars) { m_attrib.setY(y); } // this.repaint(); } /** * Set the index of the attribute to use for colouring * @param c the index of the attribute to use for colouring */ public void setCindex(int c) { m_cIndex = c; m_plot2D.setCindex(c); if (m_showAttBars) { m_attrib.setCindex(c, m_plot2D.getMaxC(), m_plot2D.getMinC()); } m_classPanel.setCindex(c); this.repaint(); } /** * Set the index of the attribute to use for the shape. * @param s the index of the attribute to use for the shape */ public void setSindex(int s) { if (s != m_sIndex) { m_shapePoints = null; m_createShape = false; } m_sIndex = s; this.repaint(); } /** * Clears all existing plots and sets a new master plot * @param newPlot the new master plot * @exception Exception if plot could not be added */ public void setMasterPlot(PlotData2D newPlot) throws Exception { m_plot2D.removeAllPlots(); this.addPlot(newPlot); } /** * Adds a plot. If there are no plots so far this plot becomes * the master plot and, if it has a custom colour defined then * the class panel is removed. * @param newPlot the plot to add. * @exception Exception if plot could not be added */ public void addPlot(PlotData2D newPlot) throws Exception { if (m_plot2D.getPlots().size() == 0) { m_plot2D.addPlot(newPlot); if (m_plotSurround.getComponentCount() > 1 && m_plotSurround.getComponent(1) == m_attrib && m_showAttBars) { try { m_attrib.setInstances(newPlot.m_plotInstances); m_attrib.setCindex(0);m_attrib.setX(0); m_attrib.setY(0); } catch (Exception ex) { // more attributes than the panel can handle? // Due to hard coded constraints in GridBagLayout m_plotSurround.remove(m_attrib); System.err.println("Warning : data contains more attributes " +"than can be displayed as attribute bars."); if (m_Log != null) { m_Log.logMessage("Warning : data contains more attributes " +"than can be displayed as attribute bars."); } } } else if (m_showAttBars) { try { m_attrib.setInstances(newPlot.m_plotInstances); m_attrib.setCindex(0);m_attrib.setX(0); m_attrib.setY(0); GridBagConstraints constraints = new GridBagConstraints(); constraints.fill = GridBagConstraints.BOTH; constraints.insets = new Insets(0, 0, 0, 0); constraints.gridx=4;constraints.gridy=0;constraints.weightx=1; constraints.gridwidth=1;constraints.gridheight=1; constraints.weighty=5; m_plotSurround.add(m_attrib, constraints); } catch (Exception ex) { System.err.println("Warning : data contains more attributes " +"than can be displayed as attribute bars."); if (m_Log != null) { m_Log.logMessage("Warning : data contains more attributes " +"than can be displayed as attribute bars."); } } } m_classPanel.setInstances(newPlot.m_plotInstances); plotReset(newPlot.m_plotInstances, newPlot.getCindex()); if (newPlot.m_useCustomColour && m_showClassPanel) { VisualizePanel.this.remove(m_classSurround); switchToLegend(); m_legendPanel.setPlotList(m_plot2D.getPlots()); m_ColourCombo.setEnabled(false); } } else { if (!newPlot.m_useCustomColour && m_showClassPanel) { VisualizePanel.this.add(m_classSurround, BorderLayout.SOUTH); m_ColourCombo.setEnabled(true); } if (m_plot2D.getPlots().size() == 1) { switchToLegend(); } m_plot2D.addPlot(newPlot); m_legendPanel.setPlotList(m_plot2D.getPlots()); } } /** * Remove the attibute panel and replace it with the legend panel */ protected void switchToLegend() { if (m_plotSurround.getComponentCount() > 1 && m_plotSurround.getComponent(1) == m_attrib) { m_plotSurround.remove(m_attrib); } if (m_plotSurround.getComponentCount() > 1 && m_plotSurround.getComponent(1) == m_legendPanel) { return; } GridBagConstraints constraints = new GridBagConstraints(); constraints.fill = GridBagConstraints.BOTH; constraints.insets = new Insets(0, 0, 0, 0); constraints.gridx=4;constraints.gridy=0;constraints.weightx=1; constraints.gridwidth=1;constraints.gridheight=1; constraints.weighty=5; m_plotSurround.add(m_legendPanel, constraints); setSindex(0); m_ShapeCombo.setEnabled(false); } protected void switchToBars() { if (m_plotSurround.getComponentCount() > 1 && m_plotSurround.getComponent(1) == m_legendPanel) { m_plotSurround.remove(m_legendPanel); } if (m_plotSurround.getComponentCount() > 1 && m_plotSurround.getComponent(1) == m_attrib) { return; } if (m_showAttBars) { try { m_attrib.setInstances(m_plot2D.getMasterPlot().m_plotInstances); m_attrib.setCindex(0);m_attrib.setX(0); m_attrib.setY(0); GridBagConstraints constraints = new GridBagConstraints(); constraints.fill = GridBagConstraints.BOTH; constraints.insets = new Insets(0, 0, 0, 0); constraints.gridx=4;constraints.gridy=0;constraints.weightx=1; constraints.gridwidth=1;constraints.gridheight=1; constraints.weighty=5; m_plotSurround.add(m_attrib, constraints); } catch (Exception ex) { System.err.println("Warning : data contains more attributes " +"than can be displayed as attribute bars."); if (m_Log != null) { m_Log.logMessage("Warning : data contains more attributes " +"than can be displayed as attribute bars."); } } } } /** * Reset the visualize panel's buttons and the plot panels instances * * @param inst the data * @param cIndex the color index */ private void plotReset(Instances inst, int cIndex) { if (m_splitListener == null) { m_submit.setText("Reset"); m_submit.setActionCommand("Reset"); //if (m_origInstances == null || m_origInstances == inst) { if (m_originalPlot == null || m_originalPlot.m_plotInstances == inst) { m_submit.setEnabled(false); } else { m_submit.setEnabled(true); } } else { m_submit.setEnabled(false); } m_plotInstances = inst; if (m_splitListener != null) { m_plotInstances.randomize(new Random()); } m_xIndex=0; m_yIndex=0; m_cIndex=cIndex; cancelShapes(); } /** * Set a list of colours to use for plotting points * @param cols a list of java.awt.Colors */ public void setColours(FastVector cols) { m_plot2D.setColours(cols); m_colorList = cols; } /** * This will draw the shapes created onto the panel. * For best visual, this should be the first thing to be drawn * (and it currently is). * @param gx The graphics context. */ private void drawShapes(Graphics gx) { //FastVector tmp = m_plot.getShapes(); if (m_shapes != null) { FastVector stmp; int x1, y1, x2, y2; for (int noa = 0; noa < m_shapes.size(); noa++) { stmp = (FastVector)m_shapes.elementAt(noa); if (((Double)stmp.elementAt(0)).intValue() == 1) { //then rectangle x1 = (int)m_plot2D.convertToPanelX(((Double)stmp.elementAt(1)). doubleValue()); y1 = (int)m_plot2D.convertToPanelY(((Double)stmp.elementAt(2)). doubleValue()); x2 = (int)m_plot2D.convertToPanelX(((Double)stmp.elementAt(3)). doubleValue()); y2 = (int)m_plot2D.convertToPanelY(((Double)stmp.elementAt(4)). doubleValue()); gx.setColor(Color.gray); gx.fillRect(x1, y1, x2 - x1, y2 - y1); gx.setColor(Color.black); gx.drawRect(x1, y1, x2 - x1, y2 - y1); } else if (((Double)stmp.elementAt(0)).intValue() == 2) { //then polygon int[] ar1, ar2; ar1 = getXCoords(stmp); ar2 = getYCoords(stmp); gx.setColor(Color.gray); gx.fillPolygon(ar1, ar2, (stmp.size() - 1) / 2); gx.setColor(Color.black); gx.drawPolyline(ar1, ar2, (stmp.size() - 1) / 2); } else if (((Double)stmp.elementAt(0)).intValue() == 3) { //then polyline int[] ar1, ar2; FastVector tmp = makePolygon(stmp); ar1 = getXCoords(tmp); ar2 = getYCoords(tmp); gx.setColor(Color.gray); gx.fillPolygon(ar1, ar2, (tmp.size() - 1) / 2); gx.setColor(Color.black); gx.drawPolyline(ar1, ar2, (tmp.size() - 1) / 2); } } } if (m_shapePoints != null) { //then the current image needs to be refreshed if (((Double)m_shapePoints.elementAt(0)).intValue() == 2 || ((Double)m_shapePoints.elementAt(0)).intValue() == 3) { gx.setColor(Color.black); gx.setXORMode(Color.white); int[] ar1, ar2; ar1 = getXCoords(m_shapePoints); ar2 = getYCoords(m_shapePoints); gx.drawPolyline(ar1, ar2, (m_shapePoints.size() - 1) / 2); m_newMousePos.width = (int)Math.ceil (m_plot2D.convertToPanelX(((Double)m_shapePoints.elementAt (m_shapePoints.size() - 2)).doubleValue())); m_newMousePos.height = (int)Math.ceil (m_plot2D.convertToPanelY(((Double)m_shapePoints.elementAt (m_shapePoints.size() - 1)).doubleValue())); gx.drawLine((int)Math.ceil (m_plot2D.convertToPanelX(((Double)m_shapePoints.elementAt (m_shapePoints.size() - 2)). doubleValue())), (int)Math.ceil(m_plot2D.convertToPanelY (((Double)m_shapePoints.elementAt (m_shapePoints.size() - 1)). doubleValue())), m_newMousePos.width, m_newMousePos.height); gx.setPaintMode(); } } } /** * This is called for polylines to see where there two lines that * extend to infinity cut the border of the view. * @param x1 an x point along the line * @param y1 the accompanying y point. * @param x2 The x coord of the end point of the line. * @param y2 The y coord of the end point of the line. * @param x 0 or the width of the border line if it has one. * @param y 0 or the height of the border line if it has one. * @param offset The offset for the border line (either for x or y * dependant on which one doesn't change). * @return double array that contains the coordinate for the point * that the polyline cuts the border (which ever side that may be). */ private double[] lineIntersect(double x1, double y1, double x2, double y2, double x, double y, double offset) { //the first 4 params are thestart and end points of a line //the next param is either 0 for no change in x or change in x, //the next param is the same for y //the final 1 is the offset for either x or y (which ever has no change) double xval; double yval; double xn = -100, yn = -100; double change; if (x == 0) { if ((x1 <= offset && offset < x2) || (x1 >= offset && offset > x2)) { //then continue xval = x1 - x2; change = (offset - x2) / xval; yn = (y1 - y2) * change + y2; if (0 <= yn && yn <= y) { //then good xn = offset; } else { //no intersect xn = -100; } } } else if (y == 0) { if ((y1 <= offset && offset < y2) || (y1 >= offset && offset > y2)) { //the continue yval = (y1 - y2); change = (offset - y2) / yval; xn = (x1 - x2) * change + x2; if (0 <= xn && xn <= x) { //then good yn = offset; } else { xn = -100; } } } double[] ret = new double[2]; ret[0] = xn; ret[1] = yn; return ret; } /** * This will convert a polyline to a polygon for drawing purposes * So that I can simply use the polygon drawing function. * @param v The polyline to convert. * @return A FastVector containing the polygon. */ private FastVector makePolygon(FastVector v) { FastVector building = new FastVector(v.size() + 10); double x1, y1, x2, y2; int edge1 = 0, edge2 = 0; for (int noa = 0; noa < v.size() - 2; noa++) { building.addElement(new Double(((Double)v.elementAt(noa)). doubleValue())); } //now clip the lines double[] new_coords; //note lineIntersect , expects the values to have been converted to //screen coords //note the first point passed is the one that gets shifted. x1 = m_plot2D.convertToPanelX(((Double)v.elementAt(1)).doubleValue()); y1 = m_plot2D.convertToPanelY(((Double)v.elementAt(2)).doubleValue()); x2 = m_plot2D.convertToPanelX(((Double)v.elementAt(3)).doubleValue()); y2 = m_plot2D.convertToPanelY(((Double)v.elementAt(4)).doubleValue()); if (x1 < 0) { //test left new_coords = lineIntersect(x1, y1, x2, y2, 0, this.getHeight(), 0); edge1 = 0; if (new_coords[0] < 0) { //then not left if (y1 < 0) { //test top new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, 0); edge1 = 1; } else { //test bottom new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, this.getHeight()); edge1 = 3; } } } else if (x1 > this.getWidth()) { //test right new_coords = lineIntersect(x1, y1, x2, y2, 0, this.getHeight(), this.getWidth()); edge1 = 2; if (new_coords[0] < 0) { //then not right if (y1 < 0) { //test top new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, 0); edge1 = 1; } else { //test bottom new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, this.getHeight()); edge1 = 3; } } } else if (y1 < 0) { //test top new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, 0); edge1 = 1; } else { //test bottom new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, this.getHeight()); edge1 = 3; } building.setElementAt(new Double(m_plot2D.convertToAttribX(new_coords[0])), 1); building.setElementAt(new Double(m_plot2D.convertToAttribY(new_coords[1])), 2); x1 = m_plot2D.convertToPanelX(((Double)v.elementAt(v.size() - 4)). doubleValue()); y1 = m_plot2D.convertToPanelY(((Double)v.elementAt(v.size() - 3)). doubleValue()); x2 = m_plot2D.convertToPanelX(((Double)v.elementAt(v.size() - 6)). doubleValue()); y2 = m_plot2D.convertToPanelY(((Double)v.elementAt(v.size() - 5)). doubleValue()); if (x1 < 0) { //test left new_coords = lineIntersect(x1, y1, x2, y2, 0, this.getHeight(), 0); edge2 = 0; if (new_coords[0] < 0) { //then not left if (y1 < 0) { //test top new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, 0); edge2 = 1; } else { //test bottom new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, this.getHeight()); edge2 = 3; } } } else if (x1 > this.getWidth()) { //test right new_coords = lineIntersect(x1, y1, x2, y2, 0, this.getHeight(), this.getWidth()); edge2 = 2; if (new_coords[0] < 0) { //then not right if (y1 < 0) { //test top new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, 0); edge2 = 1; } else { //test bottom new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, this.getHeight()); edge2 = 3; } } } else if (y1 < 0) { //test top new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, 0); edge2 = 1; } else { //test bottom new_coords = lineIntersect(x1, y1, x2, y2, this.getWidth(), 0, this.getHeight()); edge2 = 3; } building.setElementAt(new Double(m_plot2D.convertToAttribX(new_coords[0])), building.size() - 2); building.setElementAt(new Double(m_plot2D.convertToAttribY(new_coords[1])), building.size() - 1); //trust me this complicated piece of code will //determine what points on the boundary of the view to add to the polygon int xp, yp; xp = this.getWidth() * ((edge2 & 1) ^ ((edge2 & 2) / 2)); yp = this.getHeight() * ((edge2 & 2) / 2); //System.out.println(((-1 + 4) % 4) + " hoi"); if (inPolyline(v, m_plot2D.convertToAttribX(xp), m_plot2D.convertToAttribY(yp))) { //then add points in a clockwise direction building.addElement(new Double(m_plot2D.convertToAttribX(xp))); building.addElement(new Double(m_plot2D.convertToAttribY(yp))); for (int noa = (edge2 + 1) % 4; noa != edge1; noa = (noa + 1) % 4) { xp = this.getWidth() * ((noa & 1) ^ ((noa & 2) / 2)); yp = this.getHeight() * ((noa & 2) / 2); building.addElement(new Double(m_plot2D.convertToAttribX(xp))); building.addElement(new Double(m_plot2D.convertToAttribY(yp))); } } else { xp = this.getWidth() * ((edge2 & 2) / 2); yp = this.getHeight() * (1 & ~((edge2 & 1) ^ ((edge2 & 2) / 2))); if (inPolyline(v, m_plot2D.convertToAttribX(xp), m_plot2D.convertToAttribY(yp))) { //then add points in anticlockwise direction building.addElement(new Double(m_plot2D.convertToAttribX(xp))); building.addElement(new Double(m_plot2D.convertToAttribY(yp))); for (int noa = (edge2 + 3) % 4; noa != edge1; noa = (noa + 3) % 4) { xp = this.getWidth() * ((noa & 2) / 2); yp = this.getHeight() * (1 & ~((noa & 1) ^ ((noa & 2) / 2))); building.addElement(new Double(m_plot2D.convertToAttribX(xp))); building.addElement(new Double(m_plot2D.convertToAttribY(yp))); } } } return building; } /** * This will extract from a polygon shape its x coodrdinates * so that an awt.Polygon can be created. * @param v The polygon shape. * @return an int array containing the screen x coords for the polygon. */ private int[] getXCoords(FastVector v) { int cach = (v.size() - 1) / 2; int[] ar = new int[cach]; for (int noa = 0; noa < cach; noa ++) { ar[noa] = (int)m_plot2D.convertToPanelX(((Double)v.elementAt(noa * 2 + 1)).doubleValue()); } return ar; } /** * This will extract from a polygon shape its y coordinates * so that an awt.Polygon can be created. * @param v The polygon shape. * @return an int array containing the screen y coords for the polygon. */ private int[] getYCoords(FastVector v) { int cach = (v.size() - 1) / 2; int[] ar = new int[cach]; for (int noa = 0; noa < cach; noa ++) { ar[noa] = (int)m_plot2D. convertToPanelY(((Double)v.elementAt(noa * 2 + 2)). doubleValue()); } return ar; } /** * Renders the polygons if necessary * @param gx the graphics context */ public void prePlot(Graphics gx) { super.paintComponent(gx); if (m_plotInstances != null) { drawShapes(gx); // will be in paintComponent of ShapePlot2D } } } /** default colours for colouring discrete class */ protected Color [] m_DefaultColors = {Color.blue, Color.red, Color.green, Color.cyan, Color.pink, new Color(255, 0, 255), Color.orange, new Color(255, 0, 0), new Color(0, 255, 0), Color.white}; /** Lets the user select the attribute for the x axis */ protected JComboBox m_XCombo = new JComboBox(); /** Lets the user select the attribute for the y axis */ protected JComboBox m_YCombo = new JComboBox(); /** Lets the user select the attribute to use for colouring */ protected JComboBox m_ColourCombo = new JComboBox(); /** Lets the user select the shape they want to create for instance * selection. */ protected JComboBox m_ShapeCombo = new JComboBox(); /** Button for the user to enter the splits. */ protected JButton m_submit = new JButton("Submit"); /** Button for the user to remove all splits. */ protected JButton m_cancel = new JButton("Clear"); /** Button for the user to open the visualized set of instances */ protected JButton m_openBut = new JButton("Open"); /** Button for the user to save the visualized set of instances */ protected JButton m_saveBut = new JButton("Save"); /** Stop the combos from growing out of control */ private Dimension COMBO_SIZE = new Dimension(250, m_saveBut .getPreferredSize().height); /** file chooser for saving instances */ protected JFileChooser m_FileChooser = new JFileChooser(new File(System.getProperty("user.dir"))); /** Filter to ensure only arff files are selected */ protected FileFilter m_ArffFilter = new ExtensionFileFilter(Instances.FILE_EXTENSION, "Arff data files"); /** Label for the jitter slider */ protected JLabel m_JitterLab= new JLabel("Jitter",SwingConstants.RIGHT); /** The jitter slider */ protected JSlider m_Jitter = new JSlider(0,50,0); /** The panel that displays the plot */ protected PlotPanel m_plot = new PlotPanel(); /** The panel that displays the attributes , using color to represent * another attribute. */ protected AttributePanel m_attrib = new AttributePanel(m_plot.m_plot2D.getBackground()); /** The panel that displays legend info if there is more than one plot */ protected LegendPanel m_legendPanel = new LegendPanel(); /** Panel that surrounds the plot panel with a titled border */ protected JPanel m_plotSurround = new JPanel(); /** Panel that surrounds the class panel with a titled border */ protected JPanel m_classSurround = new JPanel(); /** An optional listener that we will inform when ComboBox selections change */ protected ActionListener listener = null; /** An optional listener that we will inform when the user creates a * split to seperate instances. */ protected VisualizePanelListener m_splitListener = null; /** The name of the plot (not currently displayed, but can be used in the containing Frame or Panel) */ protected String m_plotName = ""; /** The panel that displays the legend for the colouring attribute */ protected ClassPanel m_classPanel = new ClassPanel(m_plot.m_plot2D.getBackground()); /** The list of the colors used */ protected FastVector m_colorList; /** These hold the names of preferred columns to visualize on---if the user has defined them in the Visualize.props file */ protected String m_preferredXDimension = null; protected String m_preferredYDimension = null; protected String m_preferredColourDimension = null; /** Show the attribute bar panel */ protected boolean m_showAttBars = true; /** Show the class panel **/ protected boolean m_showClassPanel = true; /** the logger */ protected Logger m_Log; /** * Sets the Logger to receive informational messages * * @param newLog the Logger that will now get info messages */ public void setLog(Logger newLog) { m_Log = newLog; } /** * Set whether the attribute bars should be shown or not. * If turned off via this method then any setting in the * properties file (if exists) is ignored. * * @param sab false if attribute bars are not to be displayed. */ public void setShowAttBars(boolean sab) { if (!sab && m_showAttBars) { m_plotSurround.remove(m_attrib); } else if (sab && !m_showAttBars) { GridBagConstraints constraints = new GridBagConstraints(); constraints.insets = new Insets(0, 0, 0, 0); constraints.gridx=4;constraints.gridy=0;constraints.weightx=1; constraints.gridwidth=1;constraints.gridheight=1;constraints.weighty=5; m_plotSurround.add(m_attrib, constraints); } m_showAttBars = sab; repaint(); } /** * Gets whether or not attribute bars are being displayed. * * @return true if attribute bars are being displayed. */ public boolean getShowAttBars() { return m_showAttBars; } /** * Set whether the class panel should be shown or not. * * @param scp false if class panel is not to be displayed */ public void setShowClassPanel(boolean scp) { if (!scp && m_showClassPanel) { remove(m_classSurround); } else if (scp && !m_showClassPanel) { add(m_classSurround, BorderLayout.SOUTH); } m_showClassPanel = scp; repaint(); } /** * Gets whether or not the class panel is being displayed. * * @return true if the class panel is being displayed. */ public boolean getShowClassPanel() { return m_showClassPanel; } /** * This constructor allows a VisualizePanelListener to be set. * * @param ls the listener to use */ public VisualizePanel(VisualizePanelListener ls) { this(); m_splitListener = ls; } /** * Set the properties for the VisualizePanel * * @param relationName the name of the relation, can be null */ private void setProperties(String relationName) { if (VisualizeUtils.VISUALIZE_PROPERTIES != null) { String thisClass = this.getClass().getName(); if (relationName == null) { String showAttBars = thisClass+".displayAttributeBars"; String val = VisualizeUtils.VISUALIZE_PROPERTIES. getProperty(showAttBars); if (val == null) { //System.err.println("Displaying attribute bars "); // m_showAttBars = true; } else { // only check if this hasn't been turned off programatically if (m_showAttBars) { if (val.compareTo("true") == 0 || val.compareTo("on") == 0) { //System.err.println("Displaying attribute bars "); m_showAttBars = true; } else { m_showAttBars = false; } } } } else { /* System.err.println("Looking for preferred visualization dimensions for " +relationName); */ String xcolKey = thisClass+"."+relationName+".XDimension"; String ycolKey = thisClass+"."+relationName+".YDimension"; String ccolKey = thisClass+"."+relationName+".ColourDimension"; m_preferredXDimension = VisualizeUtils.VISUALIZE_PROPERTIES. getProperty(xcolKey); /* if (m_preferredXDimension == null) { System.err.println("No preferred X dimension found in " +VisualizeUtils.PROPERTY_FILE +" for "+xcolKey); } else { System.err.println("Setting preferred X dimension to " +m_preferredXDimension); }*/ m_preferredYDimension = VisualizeUtils.VISUALIZE_PROPERTIES. getProperty(ycolKey); /* if (m_preferredYDimension == null) { System.err.println("No preferred Y dimension found in " +VisualizeUtils.PROPERTY_FILE +" for "+ycolKey); } else { System.err.println("Setting preferred dimension Y to " +m_preferredYDimension); }*/ m_preferredColourDimension = VisualizeUtils.VISUALIZE_PROPERTIES. getProperty(ccolKey); /* if (m_preferredColourDimension == null) { System.err.println("No preferred Colour dimension found in " +VisualizeUtils.PROPERTY_FILE +" for "+ycolKey); } else { System.err.println("Setting preferred Colour dimension to " +m_preferredColourDimension); }*/ } } } /** * Constructor */ public VisualizePanel() { super(); setProperties(null); m_FileChooser.setFileFilter(m_ArffFilter); m_FileChooser.setFileSelectionMode(JFileChooser.FILES_ONLY); m_XCombo.setToolTipText("Select the attribute for the x axis"); m_YCombo.setToolTipText("Select the attribute for the y axis"); m_ColourCombo.setToolTipText("Select the attribute to colour on"); m_ShapeCombo.setToolTipText("Select the shape to use for data selection"); m_XCombo.setPreferredSize(COMBO_SIZE); m_YCombo.setPreferredSize(COMBO_SIZE); m_ColourCombo.setPreferredSize(COMBO_SIZE); m_ShapeCombo.setPreferredSize(COMBO_SIZE); m_XCombo.setMaximumSize(COMBO_SIZE); m_YCombo.setMaximumSize(COMBO_SIZE); m_ColourCombo.setMaximumSize(COMBO_SIZE); m_ShapeCombo.setMaximumSize(COMBO_SIZE); m_XCombo.setMinimumSize(COMBO_SIZE); m_YCombo.setMinimumSize(COMBO_SIZE); m_ColourCombo.setMinimumSize(COMBO_SIZE); m_ShapeCombo.setMinimumSize(COMBO_SIZE); ////////// m_XCombo.setEnabled(false); m_YCombo.setEnabled(false); m_ColourCombo.setEnabled(false); m_ShapeCombo.setEnabled(false); // tell the class panel and the legend panel that we want to know when // colours change m_classPanel.addRepaintNotify(this); m_legendPanel.addRepaintNotify(this); // Check the default colours against the background colour of the // plot panel. If any are equal to the background colour then // change them (so they are visible :-) for (int i = 0; i < m_DefaultColors.length; i++) { Color c = m_DefaultColors[i]; if (c.equals(m_plot.m_plot2D.getBackground())) { int red = c.getRed(); int blue = c.getBlue(); int green = c.getGreen(); red += (red < 128) ? (255 - red) / 2 : -(red / 2); blue += (blue < 128) ? (blue - red) / 2 : -(blue / 2); green += (green< 128) ? (255 - green) / 2 : -(green / 2); m_DefaultColors[i] = new Color(red, green, blue); } } m_classPanel.setDefaultColourList(m_DefaultColors); m_attrib.setDefaultColourList(m_DefaultColors); m_colorList = new FastVector(10); for (int noa = m_colorList.size(); noa < 10; noa++) { Color pc = m_DefaultColors[noa % 10]; int ija = noa / 10; ija *= 2; for (int j=0;j<ija;j++) { pc = pc.darker(); } m_colorList.addElement(pc); } m_plot.setColours(m_colorList); m_classPanel.setColours(m_colorList); m_attrib.setColours(m_colorList); m_attrib.addAttributePanelListener(new AttributePanelListener() { public void attributeSelectionChange(AttributePanelEvent e) { if (e.m_xChange) { m_XCombo.setSelectedIndex(e.m_indexVal); } else { m_YCombo.setSelectedIndex(e.m_indexVal); } } }); m_XCombo.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { int selected = m_XCombo.getSelectedIndex(); if (selected < 0) { selected = 0; } m_plot.setXindex(selected); // try sending on the event if anyone is listening if (listener != null) { listener.actionPerformed(e); } } }); m_YCombo.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { int selected = m_YCombo.getSelectedIndex(); if (selected < 0) { selected = 0; } m_plot.setYindex(selected); // try sending on the event if anyone is listening if (listener != null) { listener.actionPerformed(e); } } }); m_ColourCombo.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { int selected = m_ColourCombo.getSelectedIndex(); if (selected < 0) { selected = 0; } m_plot.setCindex(selected); if (listener != null) { listener.actionPerformed(e); } } }); /////// m_ShapeCombo.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { int selected = m_ShapeCombo.getSelectedIndex(); if (selected < 0) { selected = 0; } m_plot.setSindex(selected); // try sending on the event if anyone is listening if (listener != null) { listener.actionPerformed(e); } } }); /////////////////////////////////////// m_Jitter.addChangeListener(new ChangeListener() { public void stateChanged(ChangeEvent e) { m_plot.setJitter(m_Jitter.getValue()); } }); m_openBut.setToolTipText("Loads previously saved instances from a file"); m_openBut.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { openVisibleInstances(); } }); m_saveBut.setEnabled(false); m_saveBut.setToolTipText("Save the visible instances to a file"); m_saveBut.addActionListener(new ActionListener() { public void actionPerformed(ActionEvent e) { saveVisibleInstances(); } }); JPanel combos = new JPanel(); GridBagLayout gb = new GridBagLayout(); GridBagConstraints constraints = new GridBagConstraints(); m_XCombo.setLightWeightPopupEnabled(false); m_YCombo.setLightWeightPopupEnabled(false); m_ColourCombo.setLightWeightPopupEnabled(false); m_ShapeCombo.setLightWeightPopupEnabled(false); combos.setBorder(BorderFactory.createEmptyBorder(10, 5, 10, 5)); combos.setLayout(gb); constraints.gridx=0;constraints.gridy=0;constraints.weightx=5; constraints.fill = GridBagConstraints.HORIZONTAL; constraints.gridwidth=2;constraints.gridheight=1; constraints.insets = new Insets(0,2,0,2); combos.add(m_XCombo,constraints); constraints.gridx=2;constraints.gridy=0;constraints.weightx=5; constraints.gridwidth=2;constraints.gridheight=1; combos.add(m_YCombo,constraints); constraints.gridx=0;constraints.gridy=1;constraints.weightx=5; constraints.gridwidth=2;constraints.gridheight=1; combos.add(m_ColourCombo,constraints); // constraints.gridx=2;constraints.gridy=1;constraints.weightx=5; constraints.gridwidth=2;constraints.gridheight=1; combos.add(m_ShapeCombo,constraints); JPanel mbts = new JPanel(); mbts.setLayout(new GridLayout(1,4)); mbts.add(m_submit); mbts.add(m_cancel); mbts.add(m_openBut); mbts.add(m_saveBut); constraints.gridx=0;constraints.gridy=2;constraints.weightx=5; constraints.gridwidth=2;constraints.gridheight=1; combos.add(mbts, constraints); //////////////////////////////// constraints.gridx=2;constraints.gridy=2;constraints.weightx=5; constraints.gridwidth=1;constraints.gridheight=1; constraints.insets = new Insets(10,0,0,5); combos.add(m_JitterLab,constraints); constraints.gridx=3;constraints.gridy=2; constraints.weightx=5; constraints.insets = new Insets(10,0,0,0); combos.add(m_Jitter,constraints); m_classSurround = new JPanel(); m_classSurround. setBorder(BorderFactory.createTitledBorder("Class colour")); m_classSurround.setLayout(new BorderLayout()); m_classPanel.setBorder(BorderFactory.createEmptyBorder(15,10,10,10)); m_classSurround.add(m_classPanel, BorderLayout.CENTER); GridBagLayout gb2 = new GridBagLayout(); m_plotSurround.setBorder(BorderFactory.createTitledBorder("Plot")); m_plotSurround.setLayout(gb2); constraints.fill = GridBagConstraints.BOTH; constraints.insets = new Insets(0, 0, 0, 10); constraints.gridx=0;constraints.gridy=0;constraints.weightx=3; constraints.gridwidth=4;constraints.gridheight=1;constraints.weighty=5; m_plotSurround.add(m_plot, constraints); if (m_showAttBars) { constraints.insets = new Insets(0, 0, 0, 0); constraints.gridx=4;constraints.gridy=0;constraints.weightx=1; constraints.gridwidth=1;constraints.gridheight=1;constraints.weighty=5; m_plotSurround.add(m_attrib, constraints); } setLayout(new BorderLayout()); add(combos, BorderLayout.NORTH); add(m_plotSurround, BorderLayout.CENTER); add(m_classSurround, BorderLayout.SOUTH); String [] SNames = new String [4]; SNames[0] = "Select Instance"; SNames[1] = "Rectangle"; SNames[2] = "Polygon"; SNames[3] = "Polyline"; m_ShapeCombo.setModel(new DefaultComboBoxModel(SNames)); m_ShapeCombo.setEnabled(true); } /** * displays the previously saved instances * * @param insts the instances to display * @throws Exception if display is not possible */ protected void openVisibleInstances(Instances insts) throws Exception { PlotData2D tempd = new PlotData2D(insts); tempd.setPlotName(insts.relationName()); tempd.addInstanceNumberAttribute(); m_plot.m_plot2D.removeAllPlots(); addPlot(tempd); // modify title Component parent = getParent(); while (parent != null) { if (parent instanceof JFrame) { ((JFrame) parent).setTitle( "Weka Classifier Visualize: " + insts.relationName() + " (display only)"); break; } else { parent = parent.getParent(); } } } /** * Loads previously saved instances from a file */ protected void openVisibleInstances() { try { int returnVal = m_FileChooser.showOpenDialog(this); if (returnVal == JFileChooser.APPROVE_OPTION) { File sFile = m_FileChooser.getSelectedFile(); if (!sFile.getName().toLowerCase(). endsWith(Instances.FILE_EXTENSION)) { sFile = new File(sFile.getParent(), sFile.getName() + Instances.FILE_EXTENSION); } File selected = sFile; Instances insts = new Instances(new BufferedReader(new FileReader(selected))); openVisibleInstances(insts); } } catch (Exception ex) { ex.printStackTrace(); m_plot.m_plot2D.removeAllPlots(); JOptionPane.showMessageDialog( this, ex.getMessage(), "Error loading file...", JOptionPane.ERROR_MESSAGE); } } /** * Save the currently visible set of instances to a file */ private void saveVisibleInstances() { FastVector plots = m_plot.m_plot2D.getPlots(); if (plots != null) { PlotData2D master = (PlotData2D)plots.elementAt(0); Instances saveInsts = new Instances(master.getPlotInstances()); for (int i = 1; i < plots.size(); i++) { PlotData2D temp = (PlotData2D)plots.elementAt(i); Instances addInsts = temp.getPlotInstances(); for (int j = 0; j < addInsts.numInstances(); j++) { saveInsts.add(addInsts.instance(j)); } } try { int returnVal = m_FileChooser.showSaveDialog(this); if (returnVal == JFileChooser.APPROVE_OPTION) { File sFile = m_FileChooser.getSelectedFile(); if (!sFile.getName().toLowerCase(). endsWith(Instances.FILE_EXTENSION)) { sFile = new File(sFile.getParent(), sFile.getName() + Instances.FILE_EXTENSION); } File selected = sFile; Writer w = new BufferedWriter(new FileWriter(selected)); w.write(saveInsts.toString()); w.close(); } } catch (Exception ex) { ex.printStackTrace(); } } } /** * Sets the index used for colouring. If this method is called then * the supplied index is used and the combo box for selecting colouring * attribute is disabled. * @param index the index of the attribute to use for colouring */ public void setColourIndex(int index) { if (index >= 0) { m_ColourCombo.setSelectedIndex(index); } else { m_ColourCombo.setSelectedIndex(0); } m_ColourCombo.setEnabled(false); } /** * Set the index of the attribute for the x axis * @param index the index for the x axis * @exception Exception if index is out of range. */ public void setXIndex(int index) throws Exception { if (index >= 0 && index < m_XCombo.getItemCount()) { m_XCombo.setSelectedIndex(index); } else { throw new Exception("x index is out of range!"); } } /** * Get the index of the attribute on the x axis * @return the index of the attribute on the x axis */ public int getXIndex() { return m_XCombo.getSelectedIndex(); } /** * Set the index of the attribute for the y axis * @param index the index for the y axis * @exception Exception if index is out of range. */ public void setYIndex(int index) throws Exception { if (index >= 0 && index < m_YCombo.getItemCount()) { m_YCombo.setSelectedIndex(index); } else { throw new Exception("y index is out of range!"); } } /** * Get the index of the attribute on the y axis * @return the index of the attribute on the x axis */ public int getYIndex() { return m_YCombo.getSelectedIndex(); } /** * Get the index of the attribute selected for coloring * @return the index of the attribute on the x axis */ public int getCIndex() { return m_ColourCombo.getSelectedIndex(); } /** * Get the index of the shape selected for creating splits. * @return The index of the shape. */ public int getSIndex() { return m_ShapeCombo.getSelectedIndex(); } /** * Set the shape for creating splits. * @param index The index of the shape. * @exception Exception if index is out of range. */ public void setSIndex(int index) throws Exception { if (index >= 0 && index < m_ShapeCombo.getItemCount()) { m_ShapeCombo.setSelectedIndex(index); } else { throw new Exception("s index is out of range!"); } } /** * Add a listener for this visualize panel * @param act an ActionListener */ public void addActionListener(ActionListener act) { listener = act; } /** * Set a name for this plot * @param plotName the name for the plot */ public void setName(String plotName) { m_plotName = plotName; } /** * Returns the name associated with this plot. "" is returned if no * name is set. * @return the name of the plot */ public String getName() { return m_plotName; } /** * Get the master plot's instances * @return the master plot's instances */ public Instances getInstances() { return m_plot.m_plotInstances; } /** * Sets the Colors in use for a different attrib * if it is not a nominal attrib and or does not have * more possible values then this will do nothing. * otherwise it will add default colors to see that * there is a color for the attrib to begin with. * @param a The index of the attribute to color. * @param i The instances object that contains the attribute. */ protected void newColorAttribute(int a, Instances i) { if (i.attribute(a).isNominal()) { for (int noa = m_colorList.size(); noa < i.attribute(a).numValues(); noa++) { Color pc = m_DefaultColors[noa % 10]; int ija = noa / 10; ija *= 2; for (int j=0;j<ija;j++) { pc = pc.brighter(); } m_colorList.addElement(pc); } m_plot.setColours(m_colorList); m_attrib.setColours(m_colorList); m_classPanel.setColours(m_colorList); } } /** * This will set the shapes for the instances. * @param l A list of the shapes, providing that * the objects in the lists are non editable the data will be * kept intact. */ public void setShapes(FastVector l) { m_plot.setShapes(l); } /** * Tells the panel to use a new set of instances. * @param inst a set of Instances */ public void setInstances(Instances inst) { if (inst.numAttributes() > 0 && inst.numInstances() > 0) { newColorAttribute(inst.numAttributes()-1, inst); } PlotData2D temp = new PlotData2D(inst); temp.setPlotName(inst.relationName()); try { setMasterPlot(temp); } catch (Exception ex) { System.err.println(ex); ex.printStackTrace(); } } /** * initializes the comboboxes based on the data * * @param inst the data to base the combobox-setup on */ public void setUpComboBoxes(Instances inst) { setProperties(inst.relationName()); int prefX = -1; int prefY = -1; if (inst.numAttributes() > 1) { prefY = 1; } int prefC = -1; String [] XNames = new String [inst.numAttributes()]; String [] YNames = new String [inst.numAttributes()]; String [] CNames = new String [inst.numAttributes()]; for (int i = 0; i < XNames.length; i++) { String type = " (" + Attribute.typeToStringShort(inst.attribute(i)) + ")"; XNames[i] = "X: "+ inst.attribute(i).name()+type; YNames[i] = "Y: "+ inst.attribute(i).name()+type; CNames[i] = "Colour: "+ inst.attribute(i).name()+type; if (m_preferredXDimension != null) { if (m_preferredXDimension.compareTo(inst.attribute(i).name()) == 0) { prefX = i; //System.err.println("Found preferred X dimension"); } } if (m_preferredYDimension != null) { if (m_preferredYDimension.compareTo(inst.attribute(i).name()) == 0) { prefY = i; //System.err.println("Found preferred Y dimension"); } } if (m_preferredColourDimension != null) { if (m_preferredColourDimension. compareTo(inst.attribute(i).name()) == 0) { prefC = i; //System.err.println("Found preferred Colour dimension"); } } } m_XCombo.setModel(new DefaultComboBoxModel(XNames)); m_YCombo.setModel(new DefaultComboBoxModel(YNames)); m_ColourCombo.setModel(new DefaultComboBoxModel(CNames)); //m_ShapeCombo.setModel(new DefaultComboBoxModel(SNames)); //m_ShapeCombo.setEnabled(true); m_XCombo.setEnabled(true); m_YCombo.setEnabled(true); if (m_splitListener == null) { m_ColourCombo.setEnabled(true); m_ColourCombo.setSelectedIndex(inst.numAttributes()-1); } m_plotSurround.setBorder((BorderFactory.createTitledBorder("Plot: " +inst.relationName()))); try { if (prefX != -1) { setXIndex(prefX); } if (prefY != -1) { setYIndex(prefY); } if (prefC != -1) { m_ColourCombo.setSelectedIndex(prefC); } } catch (Exception ex) { System.err.println("Problem setting preferred Visualization dimensions"); } } /** * Removes all the plots. */ public void removeAllPlots() { m_plot.removeAllPlots(); } /** * Set the master plot for the visualize panel * @param newPlot the new master plot * @exception Exception if the master plot could not be set */ public void setMasterPlot(PlotData2D newPlot) throws Exception { m_plot.setMasterPlot(newPlot); setUpComboBoxes(newPlot.m_plotInstances); m_saveBut.setEnabled(true); repaint(); } /** * Set a new plot to the visualize panel * @param newPlot the new plot to add * @exception Exception if the plot could not be added */ public void addPlot(PlotData2D newPlot) throws Exception { m_plot.addPlot(newPlot); if (m_plot.m_plot2D.getMasterPlot() != null) { setUpComboBoxes(newPlot.m_plotInstances); } m_saveBut.setEnabled(true); repaint(); } /** * Returns the underlying plot panel. * * @return the plot panel */ public PlotPanel getPlotPanel() { return m_plot; } /** * Main method for testing this class * * @param args the commandline parameters */ public static void main(String [] args) { try { if (args.length < 1) { System.err.println("Usage : weka.gui.visualize.VisualizePanel " +"<dataset> [<dataset> <dataset>...]"); System.exit(1); } weka.core.logging.Logger.log(weka.core.logging.Logger.Level.INFO, "Logging started"); final javax.swing.JFrame jf = new javax.swing.JFrame("Weka Explorer: Visualize"); jf.setSize(500,400); jf.getContentPane().setLayout(new BorderLayout()); final VisualizePanel sp = new VisualizePanel(); jf.getContentPane().add(sp, BorderLayout.CENTER); jf.addWindowListener(new java.awt.event.WindowAdapter() { public void windowClosing(java.awt.event.WindowEvent e) { jf.dispose(); System.exit(0); } }); jf.setVisible(true); if (args.length >= 1) { for (int j = 0; j < args.length; j++) { System.err.println("Loading instances from " + args[j]); java.io.Reader r = new java.io.BufferedReader( new java.io.FileReader(args[j])); Instances i = new Instances(r); i.setClassIndex(i.numAttributes()-1); PlotData2D pd1 = new PlotData2D(i); if (j == 0) { pd1.setPlotName("Master plot"); sp.setMasterPlot(pd1); } else { pd1.setPlotName("Plot "+(j+1)); pd1.m_useCustomColour = true; pd1.m_customColour = (j % 2 == 0) ? Color.red : Color.blue; sp.addPlot(pd1); } } } } catch (Exception ex) { ex.printStackTrace(); System.err.println(ex.getMessage()); } } }