/* Copyright 2008-2010 Gephi Authors : Mathieu Bastian <mathieu.bastian@gephi.org> Website : http://www.gephi.org This file is part of Gephi. DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS HEADER. Copyright 2011 Gephi Consortium. All rights reserved. The contents of this file are subject to the terms of either the GNU General Public License Version 3 only ("GPL") or the Common Development and Distribution License("CDDL") (collectively, the "License"). You may not use this file except in compliance with the License. You can obtain a copy of the License at http://gephi.org/about/legal/license-notice/ or /cddl-1.0.txt and /gpl-3.0.txt. See the License for the specific language governing permissions and limitations under the License. When distributing the software, include this License Header Notice in each file and include the License files at /cddl-1.0.txt and /gpl-3.0.txt. 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Contributor(s): Portions Copyrighted 2011 Gephi Consortium. */ package org.gephi.visualization.bridge; import java.util.ArrayList; import java.util.List; import org.gephi.data.attributes.type.TimeInterval; import org.gephi.dynamic.DynamicUtilities; import org.gephi.dynamic.api.DynamicController; import org.gephi.dynamic.api.DynamicModel; import org.gephi.dynamic.api.DynamicModelEvent; import org.gephi.dynamic.api.DynamicModelListener; import org.gephi.graph.api.Edge; import org.gephi.graph.api.EdgeIterable; import org.gephi.graph.api.Graph; import org.gephi.graph.api.GraphController; import org.gephi.graph.api.GraphModel; import org.gephi.graph.api.Group; import org.gephi.graph.api.HierarchicalGraph; import org.gephi.graph.api.Node; import org.gephi.graph.api.Model; import org.gephi.graph.api.NodeIterable; import org.gephi.visualization.GraphLimits; import org.gephi.visualization.VizArchitecture; import org.gephi.visualization.VizController; import org.gephi.visualization.apiimpl.ModelImpl; import org.gephi.visualization.apiimpl.VizConfig; import org.gephi.visualization.api.initializer.Modeler; import org.gephi.visualization.api.objects.ModelClass; import org.gephi.visualization.hull.ConvexHull; import org.gephi.visualization.mode.ModeManager; import org.gephi.visualization.opengl.AbstractEngine; import org.gephi.visualization.opengl.compatibility.objects.Arrow2dModel; import org.gephi.visualization.opengl.compatibility.objects.ConvexHullModel; import org.gephi.visualization.opengl.compatibility.objects.Edge2dModel; import org.openide.util.Lookup; /** * * @author Mathieu Bastian */ public class DHNSDataBridge implements DataBridge, VizArchitecture, DynamicModelListener { //Architecture protected AbstractEngine engine; protected GraphController controller; protected HierarchicalGraph graph; private VizConfig vizConfig; protected ModeManager modeManager; protected GraphLimits limits; protected DynamicController dynamicController; protected DynamicModel dynamicModel; protected boolean undirected = false; //Version protected int nodeVersion = -1; protected int edgeVersion = -1; protected int graphView = 0; protected GraphModel gm; //Attributes private int cacheMarker = 0; @Override public void initArchitecture() { this.engine = VizController.getInstance().getEngine(); controller = Lookup.getDefault().lookup(GraphController.class); this.vizConfig = VizController.getInstance().getVizConfig(); this.modeManager = VizController.getInstance().getModeManager(); this.limits = VizController.getInstance().getLimits(); this.dynamicController = Lookup.getDefault().lookup(DynamicController.class); } public void updateWorld() { //System.out.println("update world"); cacheMarker++; GraphModel graphModel = controller.getModel(); if (graphModel == null) { engine.worldUpdated(cacheMarker); return; } if (gm != null && gm != graphModel) { reset(); } gm = graphModel; HierarchicalGraph graph; if (graphModel.isDirected()) { undirected = false; graph = graphModel.getHierarchicalDirectedGraphVisible(); } else if (graphModel.isUndirected()) { undirected = true; graph = graphModel.getHierarchicalUndirectedGraphVisible(); } else if (graphModel.isMixed()) { undirected = false; graph = graphModel.getHierarchicalMixedGraphVisible(); } else { undirected = false; graph = graphModel.getHierarchicalDirectedGraphVisible(); } if (dynamicModel == null) { dynamicModel = dynamicController.getModel(); dynamicController.addModelListener(this); } graphView = graph.getView().getViewId(); ModelClass[] object3dClasses = engine.getModelClasses(); graph.readLock(); ModelClass nodeClass = object3dClasses[AbstractEngine.CLASS_NODE]; if (nodeClass.isEnabled() && (graph.getNodeVersion() > nodeVersion || modeManager.requireModeChange())) { updateNodes(graph); nodeClass.setCacheMarker(cacheMarker); } ModelClass edgeClass = object3dClasses[AbstractEngine.CLASS_EDGE]; if (edgeClass.isEnabled() && (graph.getEdgeVersion() > edgeVersion || modeManager.requireModeChange())) { updateEdges(graph); updateMetaEdges(graph); edgeClass.setCacheMarker(cacheMarker); if (!undirected && vizConfig.isShowArrows()) { object3dClasses[AbstractEngine.CLASS_ARROW].setCacheMarker(cacheMarker); } } ModelClass potatoClass = object3dClasses[AbstractEngine.CLASS_POTATO]; if (potatoClass.isEnabled() && (graph.getNodeVersion() > nodeVersion || modeManager.requireModeChange())) { updatePotatoes(graph); potatoClass.setCacheMarker(cacheMarker); } nodeVersion = graph.getNodeVersion(); edgeVersion = graph.getEdgeVersion(); graph.readUnlock(); engine.worldUpdated(cacheMarker); } private void updateNodes(HierarchicalGraph graph) { Modeler nodeInit = engine.getModelClasses()[AbstractEngine.CLASS_NODE].getCurrentModeler(); NodeIterable nodeIterable; nodeIterable = graph.getNodes(); for (Node node : nodeIterable) { Model obj = node.getNodeData().getModel(); if (obj == null) { //Model is null, ADD obj = nodeInit.initModel(node.getNodeData()); engine.addObject(AbstractEngine.CLASS_NODE, (ModelImpl) obj); } else if (!obj.isValid()) { engine.addObject(AbstractEngine.CLASS_NODE, (ModelImpl) obj); } obj.setCacheMarker(cacheMarker); //Modeaction if (modeManager.getMode().equals(ModeManager.AVAILABLE_MODES.HIGHLIGHT)) { ModelImpl impl = (ModelImpl) obj; // if (!node.isVisible()) { // ColorLayer.layerColor(impl, 0.8f, 0.8f, 0.8f); // } } } } private void updateEdges(HierarchicalGraph graph) { Modeler edgeInit = engine.getModelClasses()[AbstractEngine.CLASS_EDGE].getCurrentModeler(); Modeler arrowInit = engine.getModelClasses()[AbstractEngine.CLASS_ARROW].getCurrentModeler(); EdgeIterable edgeIterable; edgeIterable = graph.getEdges(); float minWeight = Float.POSITIVE_INFINITY; float maxWeight = Float.NEGATIVE_INFINITY; TimeInterval timeInterval = DynamicUtilities.getVisibleInterval(dynamicModel); for (Edge edge : edgeIterable) { if (edge.getSource().getNodeData().getModel() == null || edge.getTarget().getNodeData().getModel() == null) { continue; } float weight = 1f; if (timeInterval == null) { weight = edge.getWeight(); } else { weight = edge.getWeight(timeInterval.getLow(), timeInterval.getHigh()); } minWeight = Math.min(minWeight, weight); maxWeight = Math.max(maxWeight, weight); Edge2dModel obj = (Edge2dModel) edge.getEdgeData().getModel(); if (obj == null) { //Model is null, ADD obj = (Edge2dModel) edgeInit.initModel(edge.getEdgeData()); engine.addObject(AbstractEngine.CLASS_EDGE, obj); if (!undirected && vizConfig.isShowArrows() && !edge.isSelfLoop()) { Arrow2dModel arrowObj = (Arrow2dModel) arrowInit.initModel(edge.getEdgeData()); engine.addObject(AbstractEngine.CLASS_ARROW, arrowObj); arrowObj.setCacheMarker(cacheMarker); arrowObj.setWeight(weight); obj.setArrow(arrowObj); } } else if (!obj.isValid()) { engine.addObject(AbstractEngine.CLASS_EDGE, obj); if (!undirected && vizConfig.isShowArrows() && !edge.isSelfLoop()) { Arrow2dModel arrowObj = obj.getArrow(); engine.addObject(AbstractEngine.CLASS_ARROW, arrowObj); arrowObj.setCacheMarker(cacheMarker); arrowObj.setWeight(weight); } } else { if (!undirected && vizConfig.isShowArrows() && !edge.isSelfLoop() && edge.isDirected()) { Arrow2dModel arrowObj = obj.getArrow(); arrowObj.setCacheMarker(cacheMarker); arrowObj.setWeight(weight); } } obj.setWeight(weight); obj.setCacheMarker(cacheMarker); } limits.setMinWeight(minWeight); limits.setMaxWeight(maxWeight); } public void updateMetaEdges(HierarchicalGraph graph) { Modeler edgeInit = engine.getModelClasses()[AbstractEngine.CLASS_EDGE].getCurrentModeler(); Modeler arrowInit = engine.getModelClasses()[AbstractEngine.CLASS_ARROW].getCurrentModeler(); float minWeight = Float.POSITIVE_INFINITY; float maxWeight = Float.NEGATIVE_INFINITY; TimeInterval timeInterval = DynamicUtilities.getVisibleInterval(dynamicModel); for (Edge edge : graph.getMetaEdges()) { if (edge.getSource().getNodeData().getModel() == null || edge.getTarget().getNodeData().getModel() == null) { continue; } float weight = 1f; if (timeInterval == null) { weight = edge.getWeight(); } else { weight = edge.getWeight(timeInterval.getLow(), timeInterval.getHigh()); } minWeight = Math.min(minWeight, weight); maxWeight = Math.max(maxWeight, weight); Edge2dModel obj = (Edge2dModel) edge.getEdgeData().getModel(); if (obj == null) { //Model is null, ADD obj = (Edge2dModel) edgeInit.initModel(edge.getEdgeData()); engine.addObject(AbstractEngine.CLASS_EDGE, obj); if (!undirected && vizConfig.isShowArrows() && !edge.isSelfLoop()) { Arrow2dModel arrowObj = (Arrow2dModel) arrowInit.initModel(edge.getEdgeData()); engine.addObject(AbstractEngine.CLASS_ARROW, arrowObj); arrowObj.setCacheMarker(cacheMarker); arrowObj.setWeight(weight); obj.setArrow(arrowObj); } } else if (!obj.isValid()) { engine.addObject(AbstractEngine.CLASS_EDGE, obj); if (!undirected && vizConfig.isShowArrows() && !edge.isSelfLoop()) { Arrow2dModel arrowObj = obj.getArrow(); engine.addObject(AbstractEngine.CLASS_ARROW, arrowObj); arrowObj.setCacheMarker(cacheMarker); arrowObj.setWeight(weight); } } else { if (!undirected && vizConfig.isShowArrows() && !edge.isSelfLoop() && edge.isDirected()) { Arrow2dModel arrowObj = obj.getArrow(); arrowObj.setCacheMarker(cacheMarker); arrowObj.setWeight(weight); } } obj.setWeight(weight); obj.setCacheMarker(cacheMarker); } limits.setMinMetaWeight(minWeight); limits.setMaxMetaWeight(maxWeight); } public void updatePotatoes(HierarchicalGraph graph) { ModelClass potatoClass = engine.getModelClasses()[AbstractEngine.CLASS_POTATO]; if (potatoClass.isEnabled()) { Modeler potInit = engine.getModelClasses()[AbstractEngine.CLASS_POTATO].getCurrentModeler(); List<ModelImpl> hulls = new ArrayList<ModelImpl>(); Node[] nodes = graph.getNodes().toArray(); for (Node n : nodes) { Node parent = graph.getParent(n); if (parent != null) { Group group = (Group) parent; Model hullModel = group.getGroupData().getHullModel(); if (hullModel != null && hullModel.isCacheMatching(cacheMarker)) { ConvexHull hull = (ConvexHull) hullModel.getObj(); hull.addNode(n); hull.setModel(hullModel); } else if (hullModel != null) { //Its not the first time the hull exist ConvexHullModel model = (ConvexHullModel) hullModel; model.setScale(1f); hullModel.setCacheMarker(cacheMarker); hulls.add((ModelImpl) hullModel); } else { ConvexHull ch = new ConvexHull(); ch.setMetaNode(parent); ch.addNode(n); ModelImpl obj = potInit.initModel(ch); group.getGroupData().setHullModel(obj); obj.setCacheMarker(cacheMarker); hulls.add(obj); } } } for (ModelImpl im : hulls) { ConvexHull hull = (ConvexHull) im.getObj(); hull.recompute(); engine.addObject(AbstractEngine.CLASS_POTATO, im); } } } public boolean requireUpdate() { if (graph == null) { //Try to get a graph GraphModel graphModel = controller.getModel(); if (graphModel != null) { graph = graphModel.getHierarchicalGraphVisible(); } } //Refresh reader if sight changed Graph g = graph; if (g != null) { if (g.getGraphModel().getVisibleView().getViewId() != graphView) { reset(); } return g.getNodeVersion() > nodeVersion || g.getEdgeVersion() > edgeVersion; } return false; } public void resetGraph() { graph = null; if(dynamicModel != null) { dynamicController.removeModelListener(this); } dynamicModel = null; } public void reset() { nodeVersion = -1; edgeVersion = -1; } private void resetClasses() { for (ModelClass objClass : engine.getModelClasses()) { if (objClass.isEnabled()) { engine.resetObjectClass(objClass); } } } public void dynamicModelChanged(DynamicModelEvent event) { if(event.getEventType().equals(DynamicModelEvent.EventType.VISIBLE_INTERVAL)) { edgeVersion = -1; } } }