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package uk.ac.ebi.ep.eptools.main;
import org.apache.log4j.Logger;
import org.springframework.context.annotation.AnnotationConfigApplicationContext;
import uk.ac.ebi.ep.data.dataconfig.DataConfig;
import uk.ac.ebi.ep.data.dataconfig.DevDataConfig;
import uk.ac.ebi.ep.data.dataconfig.GlobalConfig;
import uk.ac.ebi.ep.data.dataconfig.ProdDataConfig;
import uk.ac.ebi.ep.parser.parsers.EnzymePortalCompoundParser;
/**
*
* @author joseph
*/
@Deprecated
public class FDATool {
private static final Logger logger = Logger.getLogger(FDATool.class);
public static void main(String args[]) throws Exception {
String profile = "";
if (args == null || args.length == 0) {
logger.error("Please provide required parameters");
System.exit(0);
}
if (args.length == 1) {
profile = args[0];
AnnotationConfigApplicationContext context = new AnnotationConfigApplicationContext();
context.getEnvironment().setActiveProfiles(profile);
context.register(DataConfig.class);
context.register(ProdDataConfig.class);
context.register(DevDataConfig.class);
context.register(GlobalConfig.class);
context.scan("uk.ac.ebi.ep.parser.config");
context.refresh();
EnzymePortalCompoundParser compoundService = context.getBean(EnzymePortalCompoundParser.class);
compoundService.loadChemblFDA();
}
}
}