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package uk.ac.ebi.ep.data.service;
import java.util.List;
import org.junit.After;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.BeforeClass;
import org.junit.Ignore;
import org.junit.Test;
import org.springframework.data.domain.Page;
import org.springframework.data.domain.Pageable;
import uk.ac.ebi.ep.data.domain.EnzymePortalCompound;
import uk.ac.ebi.ep.data.domain.EnzymePortalDisease;
import uk.ac.ebi.ep.data.domain.EnzymePortalEcNumbers;
import uk.ac.ebi.ep.data.domain.EnzymePortalPathways;
import uk.ac.ebi.ep.data.domain.EnzymePortalReaction;
import uk.ac.ebi.ep.data.domain.RelatedProteins;
import uk.ac.ebi.ep.data.domain.UniprotEntry;
import uk.ac.ebi.ep.data.domain.UniprotXref;
import uk.ac.ebi.ep.data.enzyme.model.EnzymeReaction;
import uk.ac.ebi.ep.data.enzyme.model.Pathway;
import uk.ac.ebi.ep.data.search.model.Compound;
import uk.ac.ebi.ep.data.search.model.Disease;
import uk.ac.ebi.ep.data.search.model.EcNumber;
import uk.ac.ebi.ep.data.search.model.Species;
import uk.ac.ebi.ep.data.search.model.Taxonomy;
/**
*
* @author joseph
*/
@Ignore
public class EnzymePortalServiceTest extends AbstractDataTest {
public EnzymePortalServiceTest() {
}
@BeforeClass
public static void setUpClass() {
}
@AfterClass
public static void tearDownClass() {
}
@Before
public void setUp() {
}
@After
public void tearDown() {
}
/**
* Test of findByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindByAccession() {
System.out.println("findByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
UniprotEntry expResult = null;
UniprotEntry result = instance.findByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findAllUniprotAccessions method, of class EnzymePortalService.
*/
@Test
public void testFindAllUniprotAccessions() {
System.out.println("findAllUniprotAccessions");
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findAllUniprotAccessions();
assertEquals(expResult, result);
}
/**
* Test of findAllDiseases method, of class EnzymePortalService.
*/
@Test
public void testFindAllDiseases() {
System.out.println("findAllDiseases");
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalDisease> expResult = null;
List<EnzymePortalDisease> result = instance.findAllDiseases();
assertEquals(expResult, result);
}
/**
* Test of findCompoundsByUniprotAccession method, of class EnzymePortalService.
*/
@Test
public void testFindCompoundsByUniprotAccession() {
System.out.println("findCompoundsByUniprotAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalCompound> expResult = null;
List<EnzymePortalCompound> result = instance.findCompoundsByUniprotAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findCompoundsByUniprotName method, of class EnzymePortalService.
*/
@Test
public void testFindCompoundsByUniprotName() {
System.out.println("findCompoundsByUniprotName");
String uniprotName = "";
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalCompound> expResult = null;
List<EnzymePortalCompound> result = instance.findCompoundsByUniprotName(uniprotName);
assertEquals(expResult, result);
}
/**
* Test of findCompoundsByNamePrefix method, of class EnzymePortalService.
*/
@Test
public void testFindCompoundsByNamePrefix() {
System.out.println("findCompoundsByNamePrefix");
List<String> namePrefixes = null;
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalCompound> expResult = null;
List<EnzymePortalCompound> result = instance.findCompoundsByNamePrefix(namePrefixes);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByAccession() {
System.out.println("findEnzymesByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
List<UniprotEntry> result = instance.findEnzymesByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByAccessions method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByAccessions_List() {
System.out.println("findEnzymesByAccessions");
List<String> accessions = null;
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
// List<UniprotEntry> result = instance.findEnzymesByAccessions(accessions);
//assertEquals(expResult, result);
}
/**
* Test of findCatalyticActivitiesByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindCatalyticActivitiesByAccession() {
System.out.println("findCatalyticActivitiesByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findCatalyticActivitiesByAccession(accession);
}
/**
* Test of findDiseasesByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindDiseasesByAccession() {
System.out.println("findDiseasesByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<Disease> expResult = null;
List<Disease> result = instance.findDiseasesByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findDiseasesByNamePrefix method, of class EnzymePortalService.
*/
@Test
public void testFindDiseasesByNamePrefix() {
System.out.println("findDiseasesByNamePrefix");
List<String> namePrefixes = null;
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalDisease> expResult = null;
List<EnzymePortalDisease> result = instance.findDiseasesByNamePrefix(namePrefixes);
assertEquals(expResult, result);
}
/**
* Test of findPDBcodesByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindPDBcodesByAccession() {
System.out.println("findPDBcodesByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<UniprotXref> expResult = null;
List<UniprotXref> result = instance.findPDBcodesByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findPathwaysByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindPathwaysByAccession() {
System.out.println("findPathwaysByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<Pathway> expResult = null;
List<Pathway> result = instance.findPathwaysByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of filterEnzymesInAccessions method, of class EnzymePortalService.
*/
@Test
public void testFilterEnzymesInAccessions() {
System.out.println("filterEnzymesInAccessions");
List<String> accessions = null;
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.filterEnzymesInAccessions(accessions);
assertEquals(expResult, result);
}
/**
* Test of findRelatedProteinsByNamePrefix method, of class EnzymePortalService.
*/
@Test
public void testFindRelatedProteinsByNamePrefix() {
System.out.println("findRelatedProteinsByNamePrefix");
String nameprefix = "";
EnzymePortalService instance = new EnzymePortalService();
RelatedProteins expResult = null;
RelatedProteins result = instance.findRelatedProteinsByNamePrefix(nameprefix);
assertEquals(expResult, result);
}
/**
* Test of findRelatedProteinsByNamePrefixes method, of class EnzymePortalService.
*/
@Test
public void testFindRelatedProteinsByNamePrefixes() {
System.out.println("findRelatedProteinsByNamePrefixes");
List<String> nameprefixes = null;
EnzymePortalService instance = new EnzymePortalService();
List<RelatedProteins> expResult = null;
List<RelatedProteins> result = instance.findRelatedProteinsByNamePrefixes(nameprefixes);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByCompound method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByCompound() {
System.out.println("findEnzymesByCompound");
String compoundId = "";
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findEnzymesByCompound(compoundId);
assertEquals(expResult, result);
}
/**
* Test of findDiseases method, of class EnzymePortalService.
*/
@Test
public void testFindDiseases() {
System.out.println("findDiseases");
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalDisease> expResult = null;
List<EnzymePortalDisease> result = instance.findDiseases();
assertEquals(expResult, result);
}
/**
* Test of findAccessionsByEc method, of class EnzymePortalService.
*/
@Test
public void testFindAccessionsByEc() {
System.out.println("findAccessionsByEc");
String ecNumber = "";
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findAccessionsByEc(ecNumber);
assertEquals(expResult, result);
}
/**
* Test of findByEcNumbersByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindByEcNumbersByAccession() {
System.out.println("findByEcNumbersByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalEcNumbers> expResult = null;
List<EnzymePortalEcNumbers> result = instance.findByEcNumbersByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findReactions method, of class EnzymePortalService.
*/
@Test
public void testFindReactions() {
System.out.println("findReactions");
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalReaction> expResult = null;
List<EnzymePortalReaction> result = instance.findReactions();
assertEquals(expResult, result);
}
/**
* Test of findPathways method, of class EnzymePortalService.
*/
@Test
public void testFindPathways() {
System.out.println("findPathways");
EnzymePortalService instance = new EnzymePortalService();
List<EnzymePortalPathways> expResult = null;
List<EnzymePortalPathways> result = instance.findPathways();
assertEquals(expResult, result);
}
/**
* Test of findAccessionsByReactionId method, of class EnzymePortalService.
*/
@Test
public void testFindAccessionsByReactionId() {
System.out.println("findAccessionsByReactionId");
String reactionId = "";
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findAccessionsByReactionId(reactionId);
assertEquals(expResult, result);
}
/**
* Test of findReactionsByAccession method, of class EnzymePortalService.
*/
@Test
public void testFindReactionsByAccession() {
System.out.println("findReactionsByAccession");
String accession = "";
EnzymePortalService instance = new EnzymePortalService();
List<EnzymeReaction> expResult = null;
List<EnzymeReaction> result = instance.findReactionsByAccession(accession);
assertEquals(expResult, result);
}
/**
* Test of findAccessionsByPathwayId method, of class EnzymePortalService.
*/
@Test
public void testFindAccessionsByPathwayId() {
System.out.println("findAccessionsByPathwayId");
String pathwayId = "";
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findAccessionsByPathwayId(pathwayId);
assertEquals(expResult, result);
}
/**
* Test of findAccessionsByTaxId method, of class EnzymePortalService.
*/
@Test
public void testFindAccessionsByTaxId() {
System.out.println("findAccessionsByTaxId");
Long taxId = null;
EnzymePortalService instance = new EnzymePortalService();
List<String> expResult = null;
List<String> result = instance.findAccessionsByTaxId(taxId);
assertEquals(expResult, result);
}
/**
* Test of getCountForOrganisms method, of class EnzymePortalService.
*/
@Test
public void testGetCountForOrganisms() {
System.out.println("getCountForOrganisms");
List<Long> taxids = null;
EnzymePortalService instance = new EnzymePortalService();
List<Taxonomy> expResult = null;
List<Taxonomy> result = instance.getCountForOrganisms(taxids);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByTaxId method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByTaxId() {
System.out.println("findEnzymesByTaxId");
Long taxId = null;
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
List<UniprotEntry> result = instance.findEnzymesByTaxId(taxId);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByTaxonomy method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByTaxonomy() {
System.out.println("findEnzymesByTaxonomy");
Long taxId = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.findEnzymesByTaxonomy(taxId, pageable);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByAccessions method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByAccessions_List_Pageable() {
System.out.println("findEnzymesByAccessions");
List<String> accessions = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.findEnzymesByAccessions(accessions, pageable);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByEcNumbers method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByEcNumbers() {
System.out.println("findEnzymesByEcNumbers");
List<String> ecNumbers = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.findEnzymesByEcNumbers(ecNumbers, pageable);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByNamePrefixes method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByNamePrefixes_List_Pageable() {
System.out.println("findEnzymesByNamePrefixes");
List<String> namePrefixes = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.findEnzymesByNamePrefixes(namePrefixes, pageable);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByNamePrefixes method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByNamePrefixes_List() {
System.out.println("findEnzymesByNamePrefixes");
List<String> namePrefixes = null;
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
List<UniprotEntry> result = instance.findEnzymesByNamePrefixes(namePrefixes);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByPathwayId method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByPathwayId() {
System.out.println("findEnzymesByPathwayId");
String pathwayId = "";
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
List<UniprotEntry> result = instance.findEnzymesByPathwayId(pathwayId);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByEc method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByEc() {
System.out.println("findEnzymesByEc");
String ec = "";
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
List<UniprotEntry> result = instance.findEnzymesByEc(ec);
assertEquals(expResult, result);
}
/**
* Test of findPathwaysByName method, of class EnzymePortalService.
*/
@Test
public void testFindPathwaysByName() {
System.out.println("findPathwaysByName");
String pathwayName = "";
EnzymePortalService instance = new EnzymePortalService();
List<Pathway> expResult = null;
List<Pathway> result = instance.findPathwaysByName(pathwayName);
assertEquals(expResult, result);
}
/**
* Test of findEnzymesByMeshId method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymesByMeshId() {
System.out.println("findEnzymesByMeshId");
String meshId = "";
EnzymePortalService instance = new EnzymePortalService();
List<UniprotEntry> expResult = null;
List<UniprotEntry> result = instance.findEnzymesByMeshId(meshId);
assertEquals(expResult, result);
}
/**
* Test of findDiseasesLike method, of class EnzymePortalService.
*/
@Test
public void testFindDiseasesLike() {
System.out.println("findDiseasesLike");
String diseaseName = "";
EnzymePortalService instance = new EnzymePortalService();
List<Disease> expResult = null;
List<Disease> result = instance.findDiseasesLike(diseaseName);
assertEquals(expResult, result);
}
/**
* Test of findDiseasesByTaxId method, of class EnzymePortalService.
*/
@Test
public void testFindDiseasesByTaxId() {
System.out.println("findDiseasesByTaxId");
Long taxId = null;
EnzymePortalService instance = new EnzymePortalService();
List<Disease> expResult = null;
List<Disease> result = instance.findDiseasesByTaxId(taxId);
assertEquals(expResult, result);
}
/**
* Test of findSpeciesByTaxId method, of class EnzymePortalService.
*/
@Test
public void testFindSpeciesByTaxId() {
System.out.println("findSpeciesByTaxId");
Long taxId = null;
EnzymePortalService instance = new EnzymePortalService();
List<Species> expResult = null;
List<Species> result = instance.findSpeciesByTaxId(taxId);
assertEquals(expResult, result);
}
/**
* Test of findCompoundsByTaxId method, of class EnzymePortalService.
*/
@Test
public void testFindCompoundsByTaxId() {
System.out.println("findCompoundsByTaxId");
Long taxId = null;
EnzymePortalService instance = new EnzymePortalService();
List<Compound> expResult = null;
List<Compound> result = instance.findCompoundsByTaxId(taxId);
assertEquals(expResult, result);
}
/**
* Test of filterBySpecieAndCompoundsAndDiseases method, of class EnzymePortalService.
*/
@Test
public void testFilterBySpecieAndCompoundsAndDiseases() {
System.out.println("filterBySpecieAndCompoundsAndDiseases");
Long taxId = null;
List<String> compoudNames = null;
List<String> diseaseNames = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.filterBySpecieAndCompoundsAndDiseases(taxId, compoudNames, diseaseNames, pageable);
assertEquals(expResult, result);
}
/**
* Test of filterBySpecieAndCompounds method, of class EnzymePortalService.
*/
@Test
public void testFilterBySpecieAndCompounds() {
System.out.println("filterBySpecieAndCompounds");
Long taxId = null;
List<String> compoudNames = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.filterBySpecieAndCompounds(taxId, compoudNames, pageable);
assertEquals(expResult, result);
}
/**
* Test of filterBySpecieAndDiseases method, of class EnzymePortalService.
*/
@Test
public void testFilterBySpecieAndDiseases() {
System.out.println("filterBySpecieAndDiseases");
Long taxId = null;
List<String> diseaseNames = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.filterBySpecieAndDiseases(taxId, diseaseNames, pageable);
assertEquals(expResult, result);
}
/**
* Test of filterBySpecie method, of class EnzymePortalService.
*/
@Test
public void testFilterBySpecie() {
System.out.println("filterBySpecie");
Long taxId = null;
Pageable pageable = null;
EnzymePortalService instance = new EnzymePortalService();
Page<UniprotEntry> expResult = null;
Page<UniprotEntry> result = instance.filterBySpecie(taxId, pageable);
assertEquals(expResult, result);
}
/**
* Test of findEnzymeFamiliesByTaxId method, of class EnzymePortalService.
*/
@Test
public void testFindEnzymeFamiliesByTaxId() {
System.out.println("findEnzymeFamiliesByTaxId");
Long taxId = null;
EnzymePortalService instance = new EnzymePortalService();
List<EcNumber> expResult = null;
List<EcNumber> result = instance.findEnzymeFamiliesByTaxId(taxId);
assertEquals(expResult, result);
// TODO review the generated test code and remove the default call to fail.
fail("The test case is a prototype.");
}
}